Gene : Gorai.012G166900 G. raimondii v2.1
Defline:  (1 of 38) 1.3.3.8 - Tetrahydroberberine oxidase / THB oxidase Genomic Order:  1669
Name:  ? Gorai.012G166900 Secondary Identifier:  ? PAC:26826893
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.012G166900 0.5kb upstream 0.5kb upstream 2948 true Chr12: 33717503-33720450 Gossypium raimondii
Gorai.012G166900 0.5kb upstream 0.5kb upstream 500 false Chr12: 33717503-33718002 Gossypium raimondii
Gorai.012G166900 0.5kb downstream 0.5kb downstream 2948 true Chr12: 33718003-33720950 Gossypium raimondii
Gorai.012G166900 0.5kb downstream 0.5kb downstream 500 false Chr12: 33720451-33720950 Gossypium raimondii
Gorai.012G166900 1.0kb upstream 1.0kb upstream 3448 true Chr12: 33717003-33720450 Gossypium raimondii
Gorai.012G166900 1.0kb upstream 1.0kb upstream 1000 false Chr12: 33717003-33718002 Gossypium raimondii
Gorai.012G166900 1.0kb downstream 1.0kb downstream 3448 true Chr12: 33718003-33721450 Gossypium raimondii
Gorai.012G166900 1.0kb downstream 1.0kb downstream 1000 false Chr12: 33720451-33721450 Gossypium raimondii
Gorai.012G166900 2.0kb upstream 2.0kb upstream 4448 true Chr12: 33716003-33720450 Gossypium raimondii
Gorai.012G166900 2.0kb upstream 2.0kb upstream 2000 false Chr12: 33716003-33718002 Gossypium raimondii
Gorai.012G166900 2.0kb downstream 2.0kb downstream 4448 true Chr12: 33718003-33722450 Gossypium raimondii
Gorai.012G166900 2.0kb downstream 2.0kb downstream 2000 false Chr12: 33720451-33722450 Gossypium raimondii
Gorai.012G166900 5.0kb upstream 5.0kb upstream 7448 true Chr12: 33713003-33720450 Gossypium raimondii
Gorai.012G166900 5.0kb upstream 5.0kb upstream 5000 false Chr12: 33713003-33718002 Gossypium raimondii
Gorai.012G166900 5.0kb downstream 5.0kb downstream 7448 true Chr12: 33718003-33725450 Gossypium raimondii
Gorai.012G166900 5.0kb downstream 5.0kb downstream 5000 false Chr12: 33720451-33725450 Gossypium raimondii
Gorai.012G166900 10.0kb upstream 10.0kb upstream 12448 true Chr12: 33708003-33720450 Gossypium raimondii
Gorai.012G166900 10.0kb upstream 10.0kb upstream 10000 false Chr12: 33708003-33718002 Gossypium raimondii
Gorai.012G166900 10.0kb downstream 10.0kb downstream 12448 true Chr12: 33718003-33730450 Gossypium raimondii
Gorai.012G166900 10.0kb downstream 10.0kb downstream 10000 false Chr12: 33720451-33730450 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841549 5264 Brassicales-Malvales View MSA
124351604 5266 SBM View MSA
124252482 5268 Malvidae View MSA
124070066 5270 Rosid View MSA
123750008 5271 Pentapetalae View MSA
122797707 5272 Eudicot View MSA
122049918 5273 Angiosperm View MSA
121351151 5274 Embryophyte View MSA
123426970 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain