Gene : Gorai.012G052700 G. raimondii v2.1
Defline:  (1 of 2) PTHR11615:SF81 - CASPARIAN STRIP MEMBRANE PROTEIN 5 Genomic Order:  527
Name:  ? Gorai.012G052700 Secondary Identifier:  ? PAC:26825926
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.012G052700 0.5kb upstream 0.5kb upstream 1452 true Chr12: 6901834-6903285 Gossypium raimondii
Gorai.012G052700 0.5kb upstream 0.5kb upstream 500 false Chr12: 6902786-6903285 Gossypium raimondii
Gorai.012G052700 0.5kb downstream 0.5kb downstream 1452 true Chr12: 6901334-6902785 Gossypium raimondii
Gorai.012G052700 0.5kb downstream 0.5kb downstream 500 false Chr12: 6901334-6901833 Gossypium raimondii
Gorai.012G052700 1.0kb upstream 1.0kb upstream 1952 true Chr12: 6901834-6903785 Gossypium raimondii
Gorai.012G052700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 6902786-6903785 Gossypium raimondii
Gorai.012G052700 1.0kb downstream 1.0kb downstream 1952 true Chr12: 6900834-6902785 Gossypium raimondii
Gorai.012G052700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 6900834-6901833 Gossypium raimondii
Gorai.012G052700 2.0kb upstream 2.0kb upstream 2952 true Chr12: 6901834-6904785 Gossypium raimondii
Gorai.012G052700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 6902786-6904785 Gossypium raimondii
Gorai.012G052700 2.0kb downstream 2.0kb downstream 2952 true Chr12: 6899834-6902785 Gossypium raimondii
Gorai.012G052700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 6899834-6901833 Gossypium raimondii
Gorai.012G052700 5.0kb upstream 5.0kb upstream 5952 true Chr12: 6901834-6907785 Gossypium raimondii
Gorai.012G052700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 6902786-6907785 Gossypium raimondii
Gorai.012G052700 5.0kb downstream 5.0kb downstream 5952 true Chr12: 6896834-6902785 Gossypium raimondii
Gorai.012G052700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 6896834-6901833 Gossypium raimondii
Gorai.012G052700 10.0kb upstream 10.0kb upstream 10952 true Chr12: 6901834-6912785 Gossypium raimondii
Gorai.012G052700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 6902786-6912785 Gossypium raimondii
Gorai.012G052700 10.0kb downstream 10.0kb downstream 10952 true Chr12: 6891834-6902785 Gossypium raimondii
Gorai.012G052700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 6891834-6901833 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839160 5264 Brassicales-Malvales View MSA
124340326 5266 SBM View MSA
124243979 5268 Malvidae View MSA
124050355 5270 Rosid View MSA
123746908 5271 Pentapetalae View MSA
122797470 5272 Eudicot View MSA
122046070 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain