Gene : Gorai.012G139600 G. raimondii v2.1
Defline:  (1 of 4) 2.5.1.20 - Rubber cis-polyprenylcistransferase / Rubber transferase Genomic Order:  1396
Name:  ? Gorai.012G139600 Secondary Identifier:  ? PAC:26828971
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5815 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.012G139600 0.5kb upstream 0.5kb upstream 1453 true Chr12: 31325313-31326765 Gossypium raimondii
Gorai.012G139600 0.5kb upstream 0.5kb upstream 500 false Chr12: 31325313-31325812 Gossypium raimondii
Gorai.012G139600 0.5kb downstream 0.5kb downstream 1453 true Chr12: 31325813-31327265 Gossypium raimondii
Gorai.012G139600 0.5kb downstream 0.5kb downstream 500 false Chr12: 31326766-31327265 Gossypium raimondii
Gorai.012G139600 1.0kb upstream 1.0kb upstream 1953 true Chr12: 31324813-31326765 Gossypium raimondii
Gorai.012G139600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 31324813-31325812 Gossypium raimondii
Gorai.012G139600 1.0kb downstream 1.0kb downstream 1953 true Chr12: 31325813-31327765 Gossypium raimondii
Gorai.012G139600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 31326766-31327765 Gossypium raimondii
Gorai.012G139600 2.0kb upstream 2.0kb upstream 2953 true Chr12: 31323813-31326765 Gossypium raimondii
Gorai.012G139600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 31323813-31325812 Gossypium raimondii
Gorai.012G139600 2.0kb downstream 2.0kb downstream 2953 true Chr12: 31325813-31328765 Gossypium raimondii
Gorai.012G139600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 31326766-31328765 Gossypium raimondii
Gorai.012G139600 5.0kb upstream 5.0kb upstream 5953 true Chr12: 31320813-31326765 Gossypium raimondii
Gorai.012G139600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 31320813-31325812 Gossypium raimondii
Gorai.012G139600 5.0kb downstream 5.0kb downstream 5953 true Chr12: 31325813-31331765 Gossypium raimondii
Gorai.012G139600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 31326766-31331765 Gossypium raimondii
Gorai.012G139600 10.0kb upstream 10.0kb upstream 10953 true Chr12: 31315813-31326765 Gossypium raimondii
Gorai.012G139600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 31315813-31325812 Gossypium raimondii
Gorai.012G139600 10.0kb downstream 10.0kb downstream 10953 true Chr12: 31325813-31336765 Gossypium raimondii
Gorai.012G139600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 31326766-31336765 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824735 5264 Brassicales-Malvales View MSA
124351128 5266 SBM View MSA
124244449 5268 Malvidae View MSA
124070400 5270 Rosid View MSA
123753715 5271 Pentapetalae View MSA
122795896 5272 Eudicot View MSA
122049873 5273 Angiosperm View MSA
121349663 5274 Embryophyte View MSA
123426106 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain