Gene : Gorai.012G052900 G. raimondii v2.1
Defline:  (1 of 5) PTHR24012:SF386 - PHRAGMOPLASTIN INTERACTING PROTEIN 1 Genomic Order:  529
Name:  ? Gorai.012G052900 Secondary Identifier:  ? PAC:26826798
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.012G052900 0.5kb upstream 0.5kb upstream 6123 true Chr12: 6944277-6950399 Gossypium raimondii
Gorai.012G052900 0.5kb upstream 0.5kb upstream 500 false Chr12: 6944277-6944776 Gossypium raimondii
Gorai.012G052900 0.5kb downstream 0.5kb downstream 6123 true Chr12: 6944777-6950899 Gossypium raimondii
Gorai.012G052900 0.5kb downstream 0.5kb downstream 500 false Chr12: 6950400-6950899 Gossypium raimondii
Gorai.012G052900 1.0kb upstream 1.0kb upstream 6623 true Chr12: 6943777-6950399 Gossypium raimondii
Gorai.012G052900 1.0kb upstream 1.0kb upstream 1000 false Chr12: 6943777-6944776 Gossypium raimondii
Gorai.012G052900 1.0kb downstream 1.0kb downstream 6623 true Chr12: 6944777-6951399 Gossypium raimondii
Gorai.012G052900 1.0kb downstream 1.0kb downstream 1000 false Chr12: 6950400-6951399 Gossypium raimondii
Gorai.012G052900 2.0kb upstream 2.0kb upstream 7623 true Chr12: 6942777-6950399 Gossypium raimondii
Gorai.012G052900 2.0kb upstream 2.0kb upstream 2000 false Chr12: 6942777-6944776 Gossypium raimondii
Gorai.012G052900 2.0kb downstream 2.0kb downstream 7623 true Chr12: 6944777-6952399 Gossypium raimondii
Gorai.012G052900 2.0kb downstream 2.0kb downstream 2000 false Chr12: 6950400-6952399 Gossypium raimondii
Gorai.012G052900 5.0kb upstream 5.0kb upstream 10623 true Chr12: 6939777-6950399 Gossypium raimondii
Gorai.012G052900 5.0kb upstream 5.0kb upstream 5000 false Chr12: 6939777-6944776 Gossypium raimondii
Gorai.012G052900 5.0kb downstream 5.0kb downstream 10623 true Chr12: 6944777-6955399 Gossypium raimondii
Gorai.012G052900 5.0kb downstream 5.0kb downstream 5000 false Chr12: 6950400-6955399 Gossypium raimondii
Gorai.012G052900 10.0kb upstream 10.0kb upstream 15623 true Chr12: 6934777-6950399 Gossypium raimondii
Gorai.012G052900 10.0kb upstream 10.0kb upstream 10000 false Chr12: 6934777-6944776 Gossypium raimondii
Gorai.012G052900 10.0kb downstream 10.0kb downstream 15623 true Chr12: 6944777-6960399 Gossypium raimondii
Gorai.012G052900 10.0kb downstream 10.0kb downstream 10000 false Chr12: 6950400-6960399 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838209 5264 Brassicales-Malvales View MSA
124337867 5266 SBM View MSA
124241415 5268 Malvidae View MSA
124060480 5270 Rosid View MSA
123737702 5271 Pentapetalae View MSA
122796328 5272 Eudicot View MSA
122049388 5273 Angiosperm View MSA
121345095 5274 Embryophyte View MSA
123424707 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain