Protein Family : polypyrimidine tract-binding protein 1 124241415

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  22

22 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
28649.t000012 (1 of 3) K14948 - polypyrimidine tract-binding protein 2 (PTBP2, NPTB) R. communis v0.1 6341   28649: 63769-70109
orange1.1g013150m.g (1 of 1) KOG1190 - Polypyrimidine tract-binding protein C. sinensis v1.1 5402   scaffold00104: 240825-246226
AT3G01150 (1 of 1) KOG1190 - Polypyrimidine tract-binding protein A. thaliana TAIR10 PTB1 2924   Chr3: 51583-54506
Thhalv10020700m.g (1 of 1) KOG1190 - Polypyrimidine tract-binding protein E. salsugineum v1.0 3368   scaffold_13: 9137665-9141032
Ciclev10011680m.g (1 of 1) KOG1190 - Polypyrimidine tract-binding protein C. clementina v1.0 5533   scaffold_6: 25039479-25045011
Lus10030688.g (1 of 6) PTHR24012:SF386 - PHRAGMOPLASTIN INTERACTING PROTEIN 1 L. usitatissimum v1.0 3050   scaffold373: 127002-130051
Lus10005233.g (1 of 6) PTHR24012:SF386 - PHRAGMOPLASTIN INTERACTING PROTEIN 1 L. usitatissimum v1.0 3370   scaffold773: 65440-68809
Gorai.012G052900 (1 of 5) PTHR24012:SF386 - PHRAGMOPLASTIN INTERACTING PROTEIN 1 G. raimondii v2.1 5623   Chr12: 6944777-6950399
Gorai.006G014900 (1 of 5) PTHR24012:SF386 - PHRAGMOPLASTIN INTERACTING PROTEIN 1 G. raimondii v2.1 5930   Chr06: 3209726-3215655
Thecc1EG018589 (1 of 1) KOG0114//KOG1190//KOG4206 - Predicted RNA-binding protein (RRM superfamily) // Polypyrimidine tract-binding protein // Spliceosomal protein snRNP-U1A/U2B T. cacao v1.1 6986   scaffold_4: 16439493-16446478
Araha.18948s0010 (1 of 1) KOG1190 - Polypyrimidine tract-binding protein A. halleri v1.1 2867   Scaffold18948: 21552-24418
Cagra.1390s0012 (1 of 3) PTHR24012:SF386 - PHRAGMOPLASTIN INTERACTING PROTEIN 1 C. grandiflora v1.1 3148   Scaffold1390: 38866-42013
Brara.E03614 (1 of 2) KOG1190 - Polypyrimidine tract-binding protein B. rapa FPsc v1.3 2940   A05: 28247026-28249965
Bostr.1460s0104 (1 of 1) KOG1190 - Polypyrimidine tract-binding protein B. stricta v1.2 3147   Scaffold1460: 428572-431718
SapurV1A.0443s0070 (1 of 5) K14948 - polypyrimidine tract-binding protein 2 (PTBP2, NPTB) S. purpurea v1.0 5418   chr04: 6161457-6166874
Manes.01G092700 (1 of 4) PTHR24012:SF386 - PHRAGMOPLASTIN INTERACTING PROTEIN 1 M. esculenta v6.1 8061   Chromosome01: 21699804-21707864
AL3G11110 (1 of 1) KOG1190 - Polypyrimidine tract-binding protein A. lyrata v2.1 2958   scaffold_3: 373648-376605
Potri.004G123300 (1 of 6) K14948 - polypyrimidine tract-binding protein 2 (PTBP2, NPTB) P. trichocarpa v3.1 5622   Chr04: 11816080-11821701
Potri.017G085400 (1 of 6) K14948 - polypyrimidine tract-binding protein 2 (PTBP2, NPTB) P. trichocarpa v3.1 7013   Chr17: 10276345-10283357
Podel.04G131400 (1 of 7) K14948 - polypyrimidine tract-binding protein 2 (PTBP2, NPTB) P. deltoides WV94 v2.1 5226   Chr04: 13075387-13080612
Podel.17G089100 (1 of 7) K14948 - polypyrimidine tract-binding protein 2 (PTBP2, NPTB) P. deltoides WV94 v2.1 5620   Chr17: 10055657-10061276
Carub.0003s0101 (1 of 3) K14948 - polypyrimidine tract-binding protein 2 (PTBP2, NPTB) C. rubella v1.1 3161   scaffold_3: 312788-315948

22 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g013150m C. sinensis v1.1 124241415 polypyrimidine tract-binding protein 1 1 5268 Malvidae
AT3G01150.1 A. thaliana TAIR10 124241415 polypyrimidine tract-binding protein 1 1 5268 Malvidae
Ciclev10011680m C. clementina v1.0 124241415 polypyrimidine tract-binding protein 1 1 5268 Malvidae
Gorai.012G052900.1 G. raimondii v2.1 124241415 polypyrimidine tract-binding protein 1 2 5268 Malvidae
Cagra.1390s0012.1.p C. grandiflora v1.1 124241415 polypyrimidine tract-binding protein 1 1 5268 Malvidae
Bostr.1460s0104.1.p B. stricta v1.2 124241415 polypyrimidine tract-binding protein 1 1 5268 Malvidae
Podel.04G131400.1.p P. deltoides WV94 v2.1 124241415 polypyrimidine tract-binding protein 1 2 5268 Malvidae
28649.m000223 R. communis v0.1 124241415 polypyrimidine tract-binding protein 1 1 5268 Malvidae
Thhalv10020700m E. salsugineum v1.0 124241415 polypyrimidine tract-binding protein 1 1 5268 Malvidae
Lus10005233 L. usitatissimum v1.0 124241415 polypyrimidine tract-binding protein 1 2 5268 Malvidae
Lus10030688 L. usitatissimum v1.0 124241415 polypyrimidine tract-binding protein 1 2 5268 Malvidae
Gorai.006G014900.1 G. raimondii v2.1 124241415 polypyrimidine tract-binding protein 1 2 5268 Malvidae
Thecc1EG018589t1 T. cacao v1.1 124241415 polypyrimidine tract-binding protein 1 1 5268 Malvidae
Araha.18948s0010.1.p A. halleri v1.1 124241415 polypyrimidine tract-binding protein 1 1 5268 Malvidae
Brara.E03614.1.p B. rapa FPsc v1.3 124241415 polypyrimidine tract-binding protein 1 1 5268 Malvidae
SapurV1A.0443s0070.1.p S. purpurea v1.0 124241415 polypyrimidine tract-binding protein 1 1 5268 Malvidae
Manes.01G092700.1.p M. esculenta v6.1 124241415 polypyrimidine tract-binding protein 1 1 5268 Malvidae
AL3G11110.t1 A. lyrata v2.1 124241415 polypyrimidine tract-binding protein 1 1 5268 Malvidae
Potri.004G123300.1.p P. trichocarpa v3.1 124241415 polypyrimidine tract-binding protein 1 2 5268 Malvidae
Potri.017G085400.6.p P. trichocarpa v3.1 124241415 polypyrimidine tract-binding protein 1 2 5268 Malvidae
Podel.17G089100.1.p P. deltoides WV94 v2.1 124241415 polypyrimidine tract-binding protein 1 2 5268 Malvidae
Carub.0003s0101.1.p C. rubella v1.1 124241415 polypyrimidine tract-binding protein 1 1 5268 Malvidae