Gene : Gorai.012G043600 G. raimondii v2.1
Defline:  (1 of 15) PTHR12411//PTHR12411:SF370 - CYSTEINE PROTEASE FAMILY C1-RELATED Genomic Order:  436
Name:  ? Gorai.012G043600 Secondary Identifier:  ? PAC:26828128
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.012G043600 0.5kb upstream 0.5kb upstream 1645 true Chr12: 5475505-5477149 Gossypium raimondii
Gorai.012G043600 0.5kb upstream 0.5kb upstream 500 false Chr12: 5475505-5476004 Gossypium raimondii
Gorai.012G043600 0.5kb downstream 0.5kb downstream 1645 true Chr12: 5476005-5477649 Gossypium raimondii
Gorai.012G043600 0.5kb downstream 0.5kb downstream 500 false Chr12: 5477150-5477649 Gossypium raimondii
Gorai.012G043600 1.0kb upstream 1.0kb upstream 2145 true Chr12: 5475005-5477149 Gossypium raimondii
Gorai.012G043600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 5475005-5476004 Gossypium raimondii
Gorai.012G043600 1.0kb downstream 1.0kb downstream 2145 true Chr12: 5476005-5478149 Gossypium raimondii
Gorai.012G043600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 5477150-5478149 Gossypium raimondii
Gorai.012G043600 2.0kb upstream 2.0kb upstream 3145 true Chr12: 5474005-5477149 Gossypium raimondii
Gorai.012G043600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 5474005-5476004 Gossypium raimondii
Gorai.012G043600 2.0kb downstream 2.0kb downstream 3145 true Chr12: 5476005-5479149 Gossypium raimondii
Gorai.012G043600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 5477150-5479149 Gossypium raimondii
Gorai.012G043600 5.0kb upstream 5.0kb upstream 6145 true Chr12: 5471005-5477149 Gossypium raimondii
Gorai.012G043600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 5471005-5476004 Gossypium raimondii
Gorai.012G043600 5.0kb downstream 5.0kb downstream 6145 true Chr12: 5476005-5482149 Gossypium raimondii
Gorai.012G043600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 5477150-5482149 Gossypium raimondii
Gorai.012G043600 10.0kb upstream 10.0kb upstream 11145 true Chr12: 5466005-5477149 Gossypium raimondii
Gorai.012G043600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 5466005-5476004 Gossypium raimondii
Gorai.012G043600 10.0kb downstream 10.0kb downstream 11145 true Chr12: 5476005-5487149 Gossypium raimondii
Gorai.012G043600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 5477150-5487149 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836594 5264 Brassicales-Malvales View MSA
124348430 5266 SBM View MSA
124254446 5268 Malvidae View MSA
124074647 5270 Rosid View MSA
123752467 5271 Pentapetalae View MSA
122797682 5272 Eudicot View MSA
122051193 5273 Angiosperm View MSA
121348840 5274 Embryophyte View MSA
123426788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain