Gene : Gorai.012G149800 G. raimondii v2.1
Defline:  (1 of 1) PTHR10509//PTHR10509:SF19 - O-METHYLTRANSFERASE-RELATED Genomic Order:  1498
Name:  ? Gorai.012G149800 Secondary Identifier:  ? PAC:26827233
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-1121 Gossypium raimondii pathologic  
Graimondii PWY-361 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.012G149800 0.5kb upstream 0.5kb upstream 2472 true Chr12: 32367371-32369842 Gossypium raimondii
Gorai.012G149800 0.5kb upstream 0.5kb upstream 500 false Chr12: 32369343-32369842 Gossypium raimondii
Gorai.012G149800 0.5kb downstream 0.5kb downstream 2472 true Chr12: 32366871-32369342 Gossypium raimondii
Gorai.012G149800 0.5kb downstream 0.5kb downstream 500 false Chr12: 32366871-32367370 Gossypium raimondii
Gorai.012G149800 1.0kb upstream 1.0kb upstream 2972 true Chr12: 32367371-32370342 Gossypium raimondii
Gorai.012G149800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 32369343-32370342 Gossypium raimondii
Gorai.012G149800 1.0kb downstream 1.0kb downstream 2972 true Chr12: 32366371-32369342 Gossypium raimondii
Gorai.012G149800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 32366371-32367370 Gossypium raimondii
Gorai.012G149800 2.0kb upstream 2.0kb upstream 3972 true Chr12: 32367371-32371342 Gossypium raimondii
Gorai.012G149800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 32369343-32371342 Gossypium raimondii
Gorai.012G149800 2.0kb downstream 2.0kb downstream 3972 true Chr12: 32365371-32369342 Gossypium raimondii
Gorai.012G149800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 32365371-32367370 Gossypium raimondii
Gorai.012G149800 5.0kb upstream 5.0kb upstream 6972 true Chr12: 32367371-32374342 Gossypium raimondii
Gorai.012G149800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 32369343-32374342 Gossypium raimondii
Gorai.012G149800 5.0kb downstream 5.0kb downstream 6972 true Chr12: 32362371-32369342 Gossypium raimondii
Gorai.012G149800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 32362371-32367370 Gossypium raimondii
Gorai.012G149800 10.0kb upstream 10.0kb upstream 11972 true Chr12: 32367371-32379342 Gossypium raimondii
Gorai.012G149800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 32369343-32379342 Gossypium raimondii
Gorai.012G149800 10.0kb downstream 10.0kb downstream 11972 true Chr12: 32357371-32369342 Gossypium raimondii
Gorai.012G149800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 32357371-32367370 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123813304 5264 Brassicales-Malvales Singleton cluster - no MSA
124309850 5266 SBM Singleton cluster - no MSA
124253255 5268 Malvidae View MSA
124070061 5270 Rosid View MSA
123746911 5271 Pentapetalae View MSA
122790683 5272 Eudicot View MSA
122043643 5273 Angiosperm View MSA
121346702 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain