Gene : Gorai.013G045000 G. raimondii v2.1
Defline:  (1 of 2) PTHR22849:SF52 - E3 UBIQUITIN-PROTEIN LIGASE PUB24-RELATED Genomic Order:  450
Name:  ? Gorai.013G045000 Secondary Identifier:  ? PAC:26790201
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G045000 0.5kb upstream 0.5kb upstream 2515 true Chr13: 3945135-3947649 Gossypium raimondii
Gorai.013G045000 0.5kb upstream 0.5kb upstream 500 false Chr13: 3945135-3945634 Gossypium raimondii
Gorai.013G045000 0.5kb downstream 0.5kb downstream 2515 true Chr13: 3945635-3948149 Gossypium raimondii
Gorai.013G045000 0.5kb downstream 0.5kb downstream 500 false Chr13: 3947650-3948149 Gossypium raimondii
Gorai.013G045000 1.0kb upstream 1.0kb upstream 3015 true Chr13: 3944635-3947649 Gossypium raimondii
Gorai.013G045000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 3944635-3945634 Gossypium raimondii
Gorai.013G045000 1.0kb downstream 1.0kb downstream 3015 true Chr13: 3945635-3948649 Gossypium raimondii
Gorai.013G045000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 3947650-3948649 Gossypium raimondii
Gorai.013G045000 2.0kb upstream 2.0kb upstream 4015 true Chr13: 3943635-3947649 Gossypium raimondii
Gorai.013G045000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 3943635-3945634 Gossypium raimondii
Gorai.013G045000 2.0kb downstream 2.0kb downstream 4015 true Chr13: 3945635-3949649 Gossypium raimondii
Gorai.013G045000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 3947650-3949649 Gossypium raimondii
Gorai.013G045000 5.0kb upstream 5.0kb upstream 7015 true Chr13: 3940635-3947649 Gossypium raimondii
Gorai.013G045000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 3940635-3945634 Gossypium raimondii
Gorai.013G045000 5.0kb downstream 5.0kb downstream 7015 true Chr13: 3945635-3952649 Gossypium raimondii
Gorai.013G045000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 3947650-3952649 Gossypium raimondii
Gorai.013G045000 10.0kb upstream 10.0kb upstream 12015 true Chr13: 3935635-3947649 Gossypium raimondii
Gorai.013G045000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 3935635-3945634 Gossypium raimondii
Gorai.013G045000 10.0kb downstream 10.0kb downstream 12015 true Chr13: 3945635-3957649 Gossypium raimondii
Gorai.013G045000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 3947650-3957649 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836099 5264 Brassicales-Malvales View MSA
124342349 5266 SBM View MSA
124246737 5268 Malvidae View MSA
124065727 5270 Rosid View MSA
123740066 5271 Pentapetalae View MSA
122793707 5272 Eudicot View MSA
122045522 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain