Gene : Gorai.013G229700 G. raimondii v2.1
Defline:  (1 of 2) PTHR13872:SF1 - DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT STT3B Genomic Order:  2297
Name:  ? Gorai.013G229700 Secondary Identifier:  ? PAC:26787003
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G229700 0.5kb upstream 0.5kb upstream 8160 true Chr13: 54839906-54848065 Gossypium raimondii
Gorai.013G229700 0.5kb upstream 0.5kb upstream 500 false Chr13: 54847566-54848065 Gossypium raimondii
Gorai.013G229700 0.5kb downstream 0.5kb downstream 8160 true Chr13: 54839406-54847565 Gossypium raimondii
Gorai.013G229700 0.5kb downstream 0.5kb downstream 500 false Chr13: 54839406-54839905 Gossypium raimondii
Gorai.013G229700 1.0kb upstream 1.0kb upstream 8660 true Chr13: 54839906-54848565 Gossypium raimondii
Gorai.013G229700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 54847566-54848565 Gossypium raimondii
Gorai.013G229700 1.0kb downstream 1.0kb downstream 8660 true Chr13: 54838906-54847565 Gossypium raimondii
Gorai.013G229700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 54838906-54839905 Gossypium raimondii
Gorai.013G229700 2.0kb upstream 2.0kb upstream 9660 true Chr13: 54839906-54849565 Gossypium raimondii
Gorai.013G229700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 54847566-54849565 Gossypium raimondii
Gorai.013G229700 2.0kb downstream 2.0kb downstream 9660 true Chr13: 54837906-54847565 Gossypium raimondii
Gorai.013G229700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 54837906-54839905 Gossypium raimondii
Gorai.013G229700 5.0kb upstream 5.0kb upstream 12660 true Chr13: 54839906-54852565 Gossypium raimondii
Gorai.013G229700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 54847566-54852565 Gossypium raimondii
Gorai.013G229700 5.0kb downstream 5.0kb downstream 12660 true Chr13: 54834906-54847565 Gossypium raimondii
Gorai.013G229700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 54834906-54839905 Gossypium raimondii
Gorai.013G229700 10.0kb upstream 10.0kb upstream 17660 true Chr13: 54839906-54857565 Gossypium raimondii
Gorai.013G229700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 54847566-54857565 Gossypium raimondii
Gorai.013G229700 10.0kb downstream 10.0kb downstream 17660 true Chr13: 54829906-54847565 Gossypium raimondii
Gorai.013G229700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 54829906-54839905 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041451 5273 Angiosperm View MSA
123813738 5264 Brassicales-Malvales Singleton cluster - no MSA
124310259 5266 SBM Singleton cluster - no MSA
124159747 5268 Malvidae Singleton cluster - no MSA
124062338 5270 Rosid View MSA
123739535 5271 Pentapetalae View MSA
122792930 5272 Eudicot View MSA
121345608 5274 Embryophyte View MSA
123425256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain