Gene : Gorai.005G097200 G. raimondii v2.1
Defline:  (1 of 1) PTHR11680:SF12 - SERINE HYDROXYMETHYLTRANSFERASE 2, MITOCHONDRIAL Genomic Order:  972
Name:  ? Gorai.005G097200 Secondary Identifier:  ? PAC:26801993
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii GLYSYN-PWY Gossypium raimondii pathologic  
Graimondii PWY-3841 Gossypium raimondii pathologic  
Graimondii SER-GLYSYN-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G097200 0.5kb upstream 0.5kb upstream 5156 true Chr05: 14690220-14695375 Gossypium raimondii
Gorai.005G097200 0.5kb upstream 0.5kb upstream 500 false Chr05: 14690220-14690719 Gossypium raimondii
Gorai.005G097200 0.5kb downstream 0.5kb downstream 5156 true Chr05: 14690720-14695875 Gossypium raimondii
Gorai.005G097200 0.5kb downstream 0.5kb downstream 500 false Chr05: 14695376-14695875 Gossypium raimondii
Gorai.005G097200 1.0kb upstream 1.0kb upstream 5656 true Chr05: 14689720-14695375 Gossypium raimondii
Gorai.005G097200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 14689720-14690719 Gossypium raimondii
Gorai.005G097200 1.0kb downstream 1.0kb downstream 5656 true Chr05: 14690720-14696375 Gossypium raimondii
Gorai.005G097200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 14695376-14696375 Gossypium raimondii
Gorai.005G097200 2.0kb upstream 2.0kb upstream 6656 true Chr05: 14688720-14695375 Gossypium raimondii
Gorai.005G097200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 14688720-14690719 Gossypium raimondii
Gorai.005G097200 2.0kb downstream 2.0kb downstream 6656 true Chr05: 14690720-14697375 Gossypium raimondii
Gorai.005G097200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 14695376-14697375 Gossypium raimondii
Gorai.005G097200 5.0kb upstream 5.0kb upstream 9656 true Chr05: 14685720-14695375 Gossypium raimondii
Gorai.005G097200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 14685720-14690719 Gossypium raimondii
Gorai.005G097200 5.0kb downstream 5.0kb downstream 9656 true Chr05: 14690720-14700375 Gossypium raimondii
Gorai.005G097200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 14695376-14700375 Gossypium raimondii
Gorai.005G097200 10.0kb upstream 10.0kb upstream 14656 true Chr05: 14680720-14695375 Gossypium raimondii
Gorai.005G097200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 14680720-14690719 Gossypium raimondii
Gorai.005G097200 10.0kb downstream 10.0kb downstream 14656 true Chr05: 14690720-14705375 Gossypium raimondii
Gorai.005G097200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 14695376-14705375 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827515 5264 Brassicales-Malvales View MSA
124339433 5266 SBM View MSA
124239143 5268 Malvidae View MSA
124064979 5270 Rosid View MSA
123747223 5271 Pentapetalae View MSA
122789073 5272 Eudicot View MSA
122045639 5273 Angiosperm View MSA
121346714 5274 Embryophyte View MSA
123424879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain