Gene : Gorai.005G100600 G. raimondii v2.1
Defline:  (1 of 4) PTHR11945//PTHR11945:SF200 - MADS BOX PROTEIN Genomic Order:  1006
Name:  ? Gorai.005G100600 Secondary Identifier:  ? PAC:26804278
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G100600 0.5kb upstream 0.5kb upstream 2999 true Chr05: 15850319-15853317 Gossypium raimondii
Gorai.005G100600 0.5kb upstream 0.5kb upstream 500 false Chr05: 15850319-15850818 Gossypium raimondii
Gorai.005G100600 0.5kb downstream 0.5kb downstream 2999 true Chr05: 15850819-15853817 Gossypium raimondii
Gorai.005G100600 0.5kb downstream 0.5kb downstream 500 false Chr05: 15853318-15853817 Gossypium raimondii
Gorai.005G100600 1.0kb upstream 1.0kb upstream 3499 true Chr05: 15849819-15853317 Gossypium raimondii
Gorai.005G100600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 15849819-15850818 Gossypium raimondii
Gorai.005G100600 1.0kb downstream 1.0kb downstream 3499 true Chr05: 15850819-15854317 Gossypium raimondii
Gorai.005G100600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 15853318-15854317 Gossypium raimondii
Gorai.005G100600 2.0kb upstream 2.0kb upstream 4499 true Chr05: 15848819-15853317 Gossypium raimondii
Gorai.005G100600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 15848819-15850818 Gossypium raimondii
Gorai.005G100600 2.0kb downstream 2.0kb downstream 4499 true Chr05: 15850819-15855317 Gossypium raimondii
Gorai.005G100600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 15853318-15855317 Gossypium raimondii
Gorai.005G100600 5.0kb upstream 5.0kb upstream 7499 true Chr05: 15845819-15853317 Gossypium raimondii
Gorai.005G100600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 15845819-15850818 Gossypium raimondii
Gorai.005G100600 5.0kb downstream 5.0kb downstream 7499 true Chr05: 15850819-15858317 Gossypium raimondii
Gorai.005G100600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 15853318-15858317 Gossypium raimondii
Gorai.005G100600 10.0kb upstream 10.0kb upstream 12499 true Chr05: 15840819-15853317 Gossypium raimondii
Gorai.005G100600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 15840819-15850818 Gossypium raimondii
Gorai.005G100600 10.0kb downstream 10.0kb downstream 12499 true Chr05: 15850819-15863317 Gossypium raimondii
Gorai.005G100600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 15853318-15863317 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123807302 5264 Brassicales-Malvales Singleton cluster - no MSA
124304175 5266 SBM Singleton cluster - no MSA
124253684 5268 Malvidae View MSA
124069767 5270 Rosid View MSA
123753647 5271 Pentapetalae View MSA
122786853 5272 Eudicot View MSA
122050633 5273 Angiosperm View MSA
121350455 5274 Embryophyte View MSA
123427239 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain