Gene : Gorai.013G111200 G. raimondii v2.1
Defline:  (1 of 4) PTHR23321:SF31 - RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN-RELATED Genomic Order:  1112
Name:  ? Gorai.013G111200 Secondary Identifier:  ? PAC:26790320
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii CALVIN-PWY Gossypium raimondii pathologic  
Graimondii PHOTOALL-PWY Gossypium raimondii pathologic  
Graimondii PWY-5723 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G111200 0.5kb upstream 0.5kb upstream 1238 true Chr13: 25489864-25491101 Gossypium raimondii
Gorai.013G111200 0.5kb upstream 0.5kb upstream 500 false Chr13: 25490602-25491101 Gossypium raimondii
Gorai.013G111200 0.5kb downstream 0.5kb downstream 1238 true Chr13: 25489364-25490601 Gossypium raimondii
Gorai.013G111200 0.5kb downstream 0.5kb downstream 500 false Chr13: 25489364-25489863 Gossypium raimondii
Gorai.013G111200 1.0kb upstream 1.0kb upstream 1738 true Chr13: 25489864-25491601 Gossypium raimondii
Gorai.013G111200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 25490602-25491601 Gossypium raimondii
Gorai.013G111200 1.0kb downstream 1.0kb downstream 1738 true Chr13: 25488864-25490601 Gossypium raimondii
Gorai.013G111200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 25488864-25489863 Gossypium raimondii
Gorai.013G111200 2.0kb upstream 2.0kb upstream 2738 true Chr13: 25489864-25492601 Gossypium raimondii
Gorai.013G111200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 25490602-25492601 Gossypium raimondii
Gorai.013G111200 2.0kb downstream 2.0kb downstream 2738 true Chr13: 25487864-25490601 Gossypium raimondii
Gorai.013G111200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 25487864-25489863 Gossypium raimondii
Gorai.013G111200 5.0kb upstream 5.0kb upstream 5738 true Chr13: 25489864-25495601 Gossypium raimondii
Gorai.013G111200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 25490602-25495601 Gossypium raimondii
Gorai.013G111200 5.0kb downstream 5.0kb downstream 5738 true Chr13: 25484864-25490601 Gossypium raimondii
Gorai.013G111200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 25484864-25489863 Gossypium raimondii
Gorai.013G111200 10.0kb upstream 10.0kb upstream 10738 true Chr13: 25489864-25500601 Gossypium raimondii
Gorai.013G111200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 25490602-25500601 Gossypium raimondii
Gorai.013G111200 10.0kb downstream 10.0kb downstream 10738 true Chr13: 25479864-25490601 Gossypium raimondii
Gorai.013G111200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 25479864-25489863 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123814221 5264 Brassicales-Malvales Singleton cluster - no MSA
124310722 5266 SBM Singleton cluster - no MSA
124254073 5268 Malvidae View MSA
124050800 5270 Rosid View MSA
123751247 5271 Pentapetalae View MSA
122773961 5272 Eudicot View MSA
122051023 5273 Angiosperm View MSA
121312251 5274 Embryophyte View MSA
123428195 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain