Gene : Gorai.013G030100 G. raimondii v2.1
Defline:  (1 of 1) PTHR22849:SF43 - U-BOX DOMAIN-CONTAINING PROTEIN 54-RELATED Genomic Order:  301
Name:  ? Gorai.013G030100 Secondary Identifier:  ? PAC:26791357
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G030100 0.5kb upstream 0.5kb upstream 1835 true Chr13: 2268051-2269885 Gossypium raimondii
Gorai.013G030100 0.5kb upstream 0.5kb upstream 500 false Chr13: 2269386-2269885 Gossypium raimondii
Gorai.013G030100 0.5kb downstream 0.5kb downstream 1835 true Chr13: 2267551-2269385 Gossypium raimondii
Gorai.013G030100 0.5kb downstream 0.5kb downstream 500 false Chr13: 2267551-2268050 Gossypium raimondii
Gorai.013G030100 1.0kb upstream 1.0kb upstream 2335 true Chr13: 2268051-2270385 Gossypium raimondii
Gorai.013G030100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 2269386-2270385 Gossypium raimondii
Gorai.013G030100 1.0kb downstream 1.0kb downstream 2335 true Chr13: 2267051-2269385 Gossypium raimondii
Gorai.013G030100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 2267051-2268050 Gossypium raimondii
Gorai.013G030100 2.0kb upstream 2.0kb upstream 3335 true Chr13: 2268051-2271385 Gossypium raimondii
Gorai.013G030100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 2269386-2271385 Gossypium raimondii
Gorai.013G030100 2.0kb downstream 2.0kb downstream 3335 true Chr13: 2266051-2269385 Gossypium raimondii
Gorai.013G030100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 2266051-2268050 Gossypium raimondii
Gorai.013G030100 5.0kb upstream 5.0kb upstream 6335 true Chr13: 2268051-2274385 Gossypium raimondii
Gorai.013G030100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 2269386-2274385 Gossypium raimondii
Gorai.013G030100 5.0kb downstream 5.0kb downstream 6335 true Chr13: 2263051-2269385 Gossypium raimondii
Gorai.013G030100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 2263051-2268050 Gossypium raimondii
Gorai.013G030100 10.0kb upstream 10.0kb upstream 11335 true Chr13: 2268051-2279385 Gossypium raimondii
Gorai.013G030100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 2269386-2279385 Gossypium raimondii
Gorai.013G030100 10.0kb downstream 10.0kb downstream 11335 true Chr13: 2258051-2269385 Gossypium raimondii
Gorai.013G030100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 2258051-2268050 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123814379 5264 Brassicales-Malvales Singleton cluster - no MSA
124310876 5266 SBM Singleton cluster - no MSA
124160261 5268 Malvidae Singleton cluster - no MSA
124062447 5270 Rosid View MSA
123744256 5271 Pentapetalae View MSA
122789600 5272 Eudicot View MSA
122042359 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain