Gene : Gorai.005G116700 G. raimondii v2.1
Defline:  (1 of 1) PTHR12581 - HIV-1 REV BINDING PROTEIN 2, 3 Genomic Order:  1167
Name:  ? Gorai.005G116700 Secondary Identifier:  ? PAC:26801396
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G116700 0.5kb upstream 0.5kb upstream 6193 true Chr05: 23276056-23282248 Gossypium raimondii
Gorai.005G116700 0.5kb upstream 0.5kb upstream 500 false Chr05: 23281749-23282248 Gossypium raimondii
Gorai.005G116700 0.5kb downstream 0.5kb downstream 6193 true Chr05: 23275556-23281748 Gossypium raimondii
Gorai.005G116700 0.5kb downstream 0.5kb downstream 500 false Chr05: 23275556-23276055 Gossypium raimondii
Gorai.005G116700 1.0kb upstream 1.0kb upstream 6693 true Chr05: 23276056-23282748 Gossypium raimondii
Gorai.005G116700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 23281749-23282748 Gossypium raimondii
Gorai.005G116700 1.0kb downstream 1.0kb downstream 6693 true Chr05: 23275056-23281748 Gossypium raimondii
Gorai.005G116700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 23275056-23276055 Gossypium raimondii
Gorai.005G116700 2.0kb upstream 2.0kb upstream 7693 true Chr05: 23276056-23283748 Gossypium raimondii
Gorai.005G116700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 23281749-23283748 Gossypium raimondii
Gorai.005G116700 2.0kb downstream 2.0kb downstream 7693 true Chr05: 23274056-23281748 Gossypium raimondii
Gorai.005G116700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 23274056-23276055 Gossypium raimondii
Gorai.005G116700 5.0kb upstream 5.0kb upstream 10693 true Chr05: 23276056-23286748 Gossypium raimondii
Gorai.005G116700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 23281749-23286748 Gossypium raimondii
Gorai.005G116700 5.0kb downstream 5.0kb downstream 10693 true Chr05: 23271056-23281748 Gossypium raimondii
Gorai.005G116700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 23271056-23276055 Gossypium raimondii
Gorai.005G116700 10.0kb upstream 10.0kb upstream 15693 true Chr05: 23276056-23291748 Gossypium raimondii
Gorai.005G116700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 23281749-23291748 Gossypium raimondii
Gorai.005G116700 10.0kb downstream 10.0kb downstream 15693 true Chr05: 23266056-23281748 Gossypium raimondii
Gorai.005G116700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 23266056-23276055 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827828 5264 Brassicales-Malvales View MSA
124336540 5266 SBM View MSA
124241113 5268 Malvidae View MSA
124064553 5270 Rosid View MSA
123738984 5271 Pentapetalae View MSA
122790120 5272 Eudicot View MSA
122041852 5273 Angiosperm View MSA
121344485 5274 Embryophyte View MSA
123424552 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain