Gene : Gorai.005G152200 G. raimondii v2.1
Defline:  (1 of 50) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  1522
Name:  ? Gorai.005G152200 Secondary Identifier:  ? PAC:26804331
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G152200 0.5kb upstream 0.5kb upstream 3975 true Chr05: 42330309-42334283 Gossypium raimondii
Gorai.005G152200 0.5kb upstream 0.5kb upstream 500 false Chr05: 42333784-42334283 Gossypium raimondii
Gorai.005G152200 0.5kb downstream 0.5kb downstream 3975 true Chr05: 42329809-42333783 Gossypium raimondii
Gorai.005G152200 0.5kb downstream 0.5kb downstream 500 false Chr05: 42329809-42330308 Gossypium raimondii
Gorai.005G152200 1.0kb upstream 1.0kb upstream 4475 true Chr05: 42330309-42334783 Gossypium raimondii
Gorai.005G152200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 42333784-42334783 Gossypium raimondii
Gorai.005G152200 1.0kb downstream 1.0kb downstream 4475 true Chr05: 42329309-42333783 Gossypium raimondii
Gorai.005G152200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 42329309-42330308 Gossypium raimondii
Gorai.005G152200 2.0kb upstream 2.0kb upstream 5475 true Chr05: 42330309-42335783 Gossypium raimondii
Gorai.005G152200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 42333784-42335783 Gossypium raimondii
Gorai.005G152200 2.0kb downstream 2.0kb downstream 5475 true Chr05: 42328309-42333783 Gossypium raimondii
Gorai.005G152200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 42328309-42330308 Gossypium raimondii
Gorai.005G152200 5.0kb upstream 5.0kb upstream 8475 true Chr05: 42330309-42338783 Gossypium raimondii
Gorai.005G152200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 42333784-42338783 Gossypium raimondii
Gorai.005G152200 5.0kb downstream 5.0kb downstream 8475 true Chr05: 42325309-42333783 Gossypium raimondii
Gorai.005G152200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 42325309-42330308 Gossypium raimondii
Gorai.005G152200 10.0kb upstream 10.0kb upstream 13475 true Chr05: 42330309-42343783 Gossypium raimondii
Gorai.005G152200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 42333784-42343783 Gossypium raimondii
Gorai.005G152200 10.0kb downstream 10.0kb downstream 13475 true Chr05: 42320309-42333783 Gossypium raimondii
Gorai.005G152200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 42320309-42330308 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831117 5264 Brassicales-Malvales View MSA
124341027 5266 SBM View MSA
124242407 5268 Malvidae View MSA
124060540 5270 Rosid View MSA
123739783 5271 Pentapetalae View MSA
122791645 5272 Eudicot View MSA
122041926 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain