Gene : Gorai.008G131800 G. raimondii v2.1
Defline:  (1 of 3) PTHR12802:SF43 - PROTEIN CCA1-RELATED Genomic Order:  1318
Name:  ? Gorai.008G131800 Secondary Identifier:  ? PAC:26815475
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G131800 0.5kb upstream 0.5kb upstream 7417 true Chr08: 37738000-37745416 Gossypium raimondii
Gorai.008G131800 0.5kb upstream 0.5kb upstream 500 false Chr08: 37744917-37745416 Gossypium raimondii
Gorai.008G131800 0.5kb downstream 0.5kb downstream 7417 true Chr08: 37737500-37744916 Gossypium raimondii
Gorai.008G131800 0.5kb downstream 0.5kb downstream 500 false Chr08: 37737500-37737999 Gossypium raimondii
Gorai.008G131800 1.0kb upstream 1.0kb upstream 7917 true Chr08: 37738000-37745916 Gossypium raimondii
Gorai.008G131800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 37744917-37745916 Gossypium raimondii
Gorai.008G131800 1.0kb downstream 1.0kb downstream 7917 true Chr08: 37737000-37744916 Gossypium raimondii
Gorai.008G131800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 37737000-37737999 Gossypium raimondii
Gorai.008G131800 2.0kb upstream 2.0kb upstream 8917 true Chr08: 37738000-37746916 Gossypium raimondii
Gorai.008G131800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 37744917-37746916 Gossypium raimondii
Gorai.008G131800 2.0kb downstream 2.0kb downstream 8917 true Chr08: 37736000-37744916 Gossypium raimondii
Gorai.008G131800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 37736000-37737999 Gossypium raimondii
Gorai.008G131800 5.0kb upstream 5.0kb upstream 11917 true Chr08: 37738000-37749916 Gossypium raimondii
Gorai.008G131800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 37744917-37749916 Gossypium raimondii
Gorai.008G131800 5.0kb downstream 5.0kb downstream 11917 true Chr08: 37733000-37744916 Gossypium raimondii
Gorai.008G131800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 37733000-37737999 Gossypium raimondii
Gorai.008G131800 10.0kb upstream 10.0kb upstream 16917 true Chr08: 37738000-37754916 Gossypium raimondii
Gorai.008G131800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 37744917-37754916 Gossypium raimondii
Gorai.008G131800 10.0kb downstream 10.0kb downstream 16917 true Chr08: 37728000-37744916 Gossypium raimondii
Gorai.008G131800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 37728000-37737999 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827456 5264 Brassicales-Malvales View MSA
124346704 5266 SBM View MSA
124237237 5268 Malvidae View MSA
124066959 5270 Rosid View MSA
123746755 5271 Pentapetalae View MSA
122793236 5272 Eudicot View MSA
122048982 5273 Angiosperm View MSA
121350117 5274 Embryophyte View MSA
123427162 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain