Gene : Gorai.005G154700 G. raimondii v2.1
Defline:  (1 of 1) PTHR11999//PTHR11999:SF105 - GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE Genomic Order:  1547
Name:  ? Gorai.005G154700 Secondary Identifier:  ? PAC:26801741
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii GLUDEG-I-PWY Gossypium raimondii pathologic  
Graimondii PWY0-1305 Gossypium raimondii pathologic  
Graimondii PWY-4321 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G154700 0.5kb upstream 0.5kb upstream 2838 true Chr05: 43649243-43652080 Gossypium raimondii
Gorai.005G154700 0.5kb upstream 0.5kb upstream 500 false Chr05: 43651581-43652080 Gossypium raimondii
Gorai.005G154700 0.5kb downstream 0.5kb downstream 2838 true Chr05: 43648743-43651580 Gossypium raimondii
Gorai.005G154700 0.5kb downstream 0.5kb downstream 500 false Chr05: 43648743-43649242 Gossypium raimondii
Gorai.005G154700 1.0kb upstream 1.0kb upstream 3338 true Chr05: 43649243-43652580 Gossypium raimondii
Gorai.005G154700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 43651581-43652580 Gossypium raimondii
Gorai.005G154700 1.0kb downstream 1.0kb downstream 3338 true Chr05: 43648243-43651580 Gossypium raimondii
Gorai.005G154700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 43648243-43649242 Gossypium raimondii
Gorai.005G154700 2.0kb upstream 2.0kb upstream 4338 true Chr05: 43649243-43653580 Gossypium raimondii
Gorai.005G154700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 43651581-43653580 Gossypium raimondii
Gorai.005G154700 2.0kb downstream 2.0kb downstream 4338 true Chr05: 43647243-43651580 Gossypium raimondii
Gorai.005G154700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 43647243-43649242 Gossypium raimondii
Gorai.005G154700 5.0kb upstream 5.0kb upstream 7338 true Chr05: 43649243-43656580 Gossypium raimondii
Gorai.005G154700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 43651581-43656580 Gossypium raimondii
Gorai.005G154700 5.0kb downstream 5.0kb downstream 7338 true Chr05: 43644243-43651580 Gossypium raimondii
Gorai.005G154700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 43644243-43649242 Gossypium raimondii
Gorai.005G154700 10.0kb upstream 10.0kb upstream 12338 true Chr05: 43649243-43661580 Gossypium raimondii
Gorai.005G154700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 43651581-43661580 Gossypium raimondii
Gorai.005G154700 10.0kb downstream 10.0kb downstream 12338 true Chr05: 43639243-43651580 Gossypium raimondii
Gorai.005G154700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 43639243-43649242 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121658615 5273 Angiosperm View MSA
123806957 5264 Brassicales-Malvales Singleton cluster - no MSA
124303842 5266 SBM Singleton cluster - no MSA
124154457 5268 Malvidae Singleton cluster - no MSA
124042737 5270 Rosid View MSA
123612911 5271 Pentapetalae View MSA
122647390 5272 Eudicot View MSA
121350824 5274 Embryophyte View MSA
123427084 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain