Gene : Gorai.008G245800 G. raimondii v2.1
Defline:  (1 of 8) 6.1.1.16 - Cysteine--tRNA ligase / Cysteinyl-tRNA synthetase Genomic Order:  2458
Name:  ? Gorai.008G245800 Secondary Identifier:  ? PAC:26814701
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii TRNA-CHARGING-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G245800 0.5kb upstream 0.5kb upstream 9693 true Chr08: 53044663-53054355 Gossypium raimondii
Gorai.008G245800 0.5kb upstream 0.5kb upstream 500 false Chr08: 53044663-53045162 Gossypium raimondii
Gorai.008G245800 0.5kb downstream 0.5kb downstream 9693 true Chr08: 53045163-53054855 Gossypium raimondii
Gorai.008G245800 0.5kb downstream 0.5kb downstream 500 false Chr08: 53054356-53054855 Gossypium raimondii
Gorai.008G245800 1.0kb upstream 1.0kb upstream 10193 true Chr08: 53044163-53054355 Gossypium raimondii
Gorai.008G245800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 53044163-53045162 Gossypium raimondii
Gorai.008G245800 1.0kb downstream 1.0kb downstream 10193 true Chr08: 53045163-53055355 Gossypium raimondii
Gorai.008G245800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 53054356-53055355 Gossypium raimondii
Gorai.008G245800 2.0kb upstream 2.0kb upstream 11193 true Chr08: 53043163-53054355 Gossypium raimondii
Gorai.008G245800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 53043163-53045162 Gossypium raimondii
Gorai.008G245800 2.0kb downstream 2.0kb downstream 11193 true Chr08: 53045163-53056355 Gossypium raimondii
Gorai.008G245800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 53054356-53056355 Gossypium raimondii
Gorai.008G245800 5.0kb upstream 5.0kb upstream 14193 true Chr08: 53040163-53054355 Gossypium raimondii
Gorai.008G245800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 53040163-53045162 Gossypium raimondii
Gorai.008G245800 5.0kb downstream 5.0kb downstream 14193 true Chr08: 53045163-53059355 Gossypium raimondii
Gorai.008G245800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 53054356-53059355 Gossypium raimondii
Gorai.008G245800 10.0kb upstream 10.0kb upstream 19193 true Chr08: 53035163-53054355 Gossypium raimondii
Gorai.008G245800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 53035163-53045162 Gossypium raimondii
Gorai.008G245800 10.0kb downstream 10.0kb downstream 19193 true Chr08: 53045163-53064355 Gossypium raimondii
Gorai.008G245800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 53054356-53064355 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830894 5264 Brassicales-Malvales View MSA
124340438 5266 SBM View MSA
124250049 5268 Malvidae View MSA
124063129 5270 Rosid View MSA
123736819 5271 Pentapetalae View MSA
122791424 5272 Eudicot View MSA
122050932 5273 Angiosperm View MSA
121350340 5274 Embryophyte View MSA
123427761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain