Gene : Gorai.005G173900 G. raimondii v2.1
Defline:  (1 of 15) 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase Genomic Order:  1739
Name:  ? Gorai.005G173900 Secondary Identifier:  ? PAC:26804120
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5080 Gossypium raimondii pathologic  
Graimondii PWY-6433 Gossypium raimondii pathologic  
Graimondii PWY-6598 Gossypium raimondii pathologic  
Graimondii PWY-7036 Gossypium raimondii pathologic  
Graimondii PWY-7601 Gossypium raimondii pathologic  
Graimondii PWY-7606 Gossypium raimondii pathologic  
Graimondii PWY-7619 Gossypium raimondii pathologic  
Graimondii PWY-7726 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G173900 0.5kb upstream 0.5kb upstream 8152 true Chr05: 50550712-50558863 Gossypium raimondii
Gorai.005G173900 0.5kb upstream 0.5kb upstream 500 false Chr05: 50550712-50551211 Gossypium raimondii
Gorai.005G173900 0.5kb downstream 0.5kb downstream 8152 true Chr05: 50551212-50559363 Gossypium raimondii
Gorai.005G173900 0.5kb downstream 0.5kb downstream 500 false Chr05: 50558864-50559363 Gossypium raimondii
Gorai.005G173900 1.0kb upstream 1.0kb upstream 8652 true Chr05: 50550212-50558863 Gossypium raimondii
Gorai.005G173900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 50550212-50551211 Gossypium raimondii
Gorai.005G173900 1.0kb downstream 1.0kb downstream 8652 true Chr05: 50551212-50559863 Gossypium raimondii
Gorai.005G173900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 50558864-50559863 Gossypium raimondii
Gorai.005G173900 2.0kb upstream 2.0kb upstream 9652 true Chr05: 50549212-50558863 Gossypium raimondii
Gorai.005G173900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 50549212-50551211 Gossypium raimondii
Gorai.005G173900 2.0kb downstream 2.0kb downstream 9652 true Chr05: 50551212-50560863 Gossypium raimondii
Gorai.005G173900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 50558864-50560863 Gossypium raimondii
Gorai.005G173900 5.0kb upstream 5.0kb upstream 12652 true Chr05: 50546212-50558863 Gossypium raimondii
Gorai.005G173900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 50546212-50551211 Gossypium raimondii
Gorai.005G173900 5.0kb downstream 5.0kb downstream 12652 true Chr05: 50551212-50563863 Gossypium raimondii
Gorai.005G173900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 50558864-50563863 Gossypium raimondii
Gorai.005G173900 10.0kb upstream 10.0kb upstream 17652 true Chr05: 50541212-50558863 Gossypium raimondii
Gorai.005G173900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 50541212-50551211 Gossypium raimondii
Gorai.005G173900 10.0kb downstream 10.0kb downstream 17652 true Chr05: 50551212-50568863 Gossypium raimondii
Gorai.005G173900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 50558864-50568863 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830884 5264 Brassicales-Malvales View MSA
124343782 5266 SBM View MSA
124240925 5268 Malvidae View MSA
124050409 5270 Rosid View MSA
123741518 5271 Pentapetalae View MSA
122787012 5272 Eudicot View MSA
122050087 5273 Angiosperm View MSA
123428985 5275 Viridiplantae View MSA
121351563 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain