Gene : Gorai.008G278800 G. raimondii v2.1
Defline:  (1 of 38) 1.3.3.8 - Tetrahydroberberine oxidase / THB oxidase Genomic Order:  2788
Name:  ? Gorai.008G278800 Secondary Identifier:  ? PAC:26812997
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G278800 0.5kb upstream 0.5kb upstream 4040 true Chr08: 55623179-55627218 Gossypium raimondii
Gorai.008G278800 0.5kb upstream 0.5kb upstream 500 false Chr08: 55623179-55623678 Gossypium raimondii
Gorai.008G278800 0.5kb downstream 0.5kb downstream 4040 true Chr08: 55623679-55627718 Gossypium raimondii
Gorai.008G278800 0.5kb downstream 0.5kb downstream 500 false Chr08: 55627219-55627718 Gossypium raimondii
Gorai.008G278800 1.0kb upstream 1.0kb upstream 4540 true Chr08: 55622679-55627218 Gossypium raimondii
Gorai.008G278800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 55622679-55623678 Gossypium raimondii
Gorai.008G278800 1.0kb downstream 1.0kb downstream 4540 true Chr08: 55623679-55628218 Gossypium raimondii
Gorai.008G278800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 55627219-55628218 Gossypium raimondii
Gorai.008G278800 2.0kb upstream 2.0kb upstream 5540 true Chr08: 55621679-55627218 Gossypium raimondii
Gorai.008G278800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 55621679-55623678 Gossypium raimondii
Gorai.008G278800 2.0kb downstream 2.0kb downstream 5540 true Chr08: 55623679-55629218 Gossypium raimondii
Gorai.008G278800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 55627219-55629218 Gossypium raimondii
Gorai.008G278800 5.0kb upstream 5.0kb upstream 8540 true Chr08: 55618679-55627218 Gossypium raimondii
Gorai.008G278800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 55618679-55623678 Gossypium raimondii
Gorai.008G278800 5.0kb downstream 5.0kb downstream 8540 true Chr08: 55623679-55632218 Gossypium raimondii
Gorai.008G278800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 55627219-55632218 Gossypium raimondii
Gorai.008G278800 10.0kb upstream 10.0kb upstream 13540 true Chr08: 55613679-55627218 Gossypium raimondii
Gorai.008G278800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 55613679-55623678 Gossypium raimondii
Gorai.008G278800 10.0kb downstream 10.0kb downstream 13540 true Chr08: 55623679-55637218 Gossypium raimondii
Gorai.008G278800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 55627219-55637218 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841549 5264 Brassicales-Malvales View MSA
124351604 5266 SBM View MSA
124252482 5268 Malvidae View MSA
124070066 5270 Rosid View MSA
123750008 5271 Pentapetalae View MSA
122797707 5272 Eudicot View MSA
122049918 5273 Angiosperm View MSA
121351151 5274 Embryophyte View MSA
123426970 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain