Gene : Gorai.009G114800 G. raimondii v2.1
Defline:  (1 of 6) PF00564//PF03108//PF04434//PF10551 - PB1 domain (PB1) // MuDR family transposase (DBD_Tnp_Mut) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  1148
Name:  ? Gorai.009G114800 Secondary Identifier:  ? PAC:26769610
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.009G114800 0.5kb upstream 0.5kb upstream 5325 true Chr09: 8413198-8418522 Gossypium raimondii
Gorai.009G114800 0.5kb upstream 0.5kb upstream 500 false Chr09: 8413198-8413697 Gossypium raimondii
Gorai.009G114800 0.5kb downstream 0.5kb downstream 5325 true Chr09: 8413698-8419022 Gossypium raimondii
Gorai.009G114800 0.5kb downstream 0.5kb downstream 500 false Chr09: 8418523-8419022 Gossypium raimondii
Gorai.009G114800 1.0kb upstream 1.0kb upstream 5825 true Chr09: 8412698-8418522 Gossypium raimondii
Gorai.009G114800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 8412698-8413697 Gossypium raimondii
Gorai.009G114800 1.0kb downstream 1.0kb downstream 5825 true Chr09: 8413698-8419522 Gossypium raimondii
Gorai.009G114800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 8418523-8419522 Gossypium raimondii
Gorai.009G114800 2.0kb upstream 2.0kb upstream 6825 true Chr09: 8411698-8418522 Gossypium raimondii
Gorai.009G114800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 8411698-8413697 Gossypium raimondii
Gorai.009G114800 2.0kb downstream 2.0kb downstream 6825 true Chr09: 8413698-8420522 Gossypium raimondii
Gorai.009G114800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 8418523-8420522 Gossypium raimondii
Gorai.009G114800 5.0kb upstream 5.0kb upstream 9825 true Chr09: 8408698-8418522 Gossypium raimondii
Gorai.009G114800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 8408698-8413697 Gossypium raimondii
Gorai.009G114800 5.0kb downstream 5.0kb downstream 9825 true Chr09: 8413698-8423522 Gossypium raimondii
Gorai.009G114800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 8418523-8423522 Gossypium raimondii
Gorai.009G114800 10.0kb upstream 10.0kb upstream 14825 true Chr09: 8403698-8418522 Gossypium raimondii
Gorai.009G114800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 8403698-8413697 Gossypium raimondii
Gorai.009G114800 10.0kb downstream 10.0kb downstream 14825 true Chr09: 8413698-8428522 Gossypium raimondii
Gorai.009G114800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 8418523-8428522 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825710 5264 Brassicales-Malvales View MSA
124349182 5266 SBM View MSA
124250884 5268 Malvidae View MSA
124072231 5270 Rosid View MSA
123753345 5271 Pentapetalae View MSA
122797917 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain