Gene : Gorai.009G036700 G. raimondii v2.1
Defline:  (1 of 45) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) Genomic Order:  367
Name:  ? Gorai.009G036700 Secondary Identifier:  ? PAC:26768248
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.009G036700 0.5kb upstream 0.5kb upstream 3768 true Chr09: 2701471-2705238 Gossypium raimondii
Gorai.009G036700 0.5kb upstream 0.5kb upstream 500 false Chr09: 2701471-2701970 Gossypium raimondii
Gorai.009G036700 0.5kb downstream 0.5kb downstream 3768 true Chr09: 2701971-2705738 Gossypium raimondii
Gorai.009G036700 0.5kb downstream 0.5kb downstream 500 false Chr09: 2705239-2705738 Gossypium raimondii
Gorai.009G036700 1.0kb upstream 1.0kb upstream 4268 true Chr09: 2700971-2705238 Gossypium raimondii
Gorai.009G036700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 2700971-2701970 Gossypium raimondii
Gorai.009G036700 1.0kb downstream 1.0kb downstream 4268 true Chr09: 2701971-2706238 Gossypium raimondii
Gorai.009G036700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 2705239-2706238 Gossypium raimondii
Gorai.009G036700 2.0kb upstream 2.0kb upstream 5268 true Chr09: 2699971-2705238 Gossypium raimondii
Gorai.009G036700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 2699971-2701970 Gossypium raimondii
Gorai.009G036700 2.0kb downstream 2.0kb downstream 5268 true Chr09: 2701971-2707238 Gossypium raimondii
Gorai.009G036700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 2705239-2707238 Gossypium raimondii
Gorai.009G036700 5.0kb upstream 5.0kb upstream 8268 true Chr09: 2696971-2705238 Gossypium raimondii
Gorai.009G036700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 2696971-2701970 Gossypium raimondii
Gorai.009G036700 5.0kb downstream 5.0kb downstream 8268 true Chr09: 2701971-2710238 Gossypium raimondii
Gorai.009G036700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 2705239-2710238 Gossypium raimondii
Gorai.009G036700 10.0kb upstream 10.0kb upstream 13268 true Chr09: 2691971-2705238 Gossypium raimondii
Gorai.009G036700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 2691971-2701970 Gossypium raimondii
Gorai.009G036700 10.0kb downstream 10.0kb downstream 13268 true Chr09: 2701971-2715238 Gossypium raimondii
Gorai.009G036700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 2705239-2715238 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026431 5273 Angiosperm View MSA
123832337 5264 Brassicales-Malvales View MSA
124343572 5266 SBM View MSA
124249654 5268 Malvidae View MSA
124066643 5270 Rosid View MSA
123751274 5271 Pentapetalae View MSA
122794411 5272 Eudicot View MSA
121348629 5274 Embryophyte View MSA
123380947 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain