Gene : Gorai.009G252100 G. raimondii v2.1
Defline:  (1 of 1) PF00195//PF02797 - Chalcone and stilbene synthases, N-terminal domain (Chal_sti_synt_N) // Chalcone and stilbene synthases, C-terminal domain (Chal_sti_synt_C) Genomic Order:  2521
Name:  ? Gorai.009G252100 Secondary Identifier:  ? PAC:26770065
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY1F-FLAVSYN Gossypium raimondii pathologic  
Graimondii PWY-6787 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.009G252100 0.5kb upstream 0.5kb upstream 2301 true Chr09: 20555360-20557660 Gossypium raimondii
Gorai.009G252100 0.5kb upstream 0.5kb upstream 500 false Chr09: 20555360-20555859 Gossypium raimondii
Gorai.009G252100 0.5kb downstream 0.5kb downstream 2301 true Chr09: 20555860-20558160 Gossypium raimondii
Gorai.009G252100 0.5kb downstream 0.5kb downstream 500 false Chr09: 20557661-20558160 Gossypium raimondii
Gorai.009G252100 1.0kb upstream 1.0kb upstream 2801 true Chr09: 20554860-20557660 Gossypium raimondii
Gorai.009G252100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 20554860-20555859 Gossypium raimondii
Gorai.009G252100 1.0kb downstream 1.0kb downstream 2801 true Chr09: 20555860-20558660 Gossypium raimondii
Gorai.009G252100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 20557661-20558660 Gossypium raimondii
Gorai.009G252100 2.0kb upstream 2.0kb upstream 3801 true Chr09: 20553860-20557660 Gossypium raimondii
Gorai.009G252100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 20553860-20555859 Gossypium raimondii
Gorai.009G252100 2.0kb downstream 2.0kb downstream 3801 true Chr09: 20555860-20559660 Gossypium raimondii
Gorai.009G252100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 20557661-20559660 Gossypium raimondii
Gorai.009G252100 5.0kb upstream 5.0kb upstream 6801 true Chr09: 20550860-20557660 Gossypium raimondii
Gorai.009G252100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 20550860-20555859 Gossypium raimondii
Gorai.009G252100 5.0kb downstream 5.0kb downstream 6801 true Chr09: 20555860-20562660 Gossypium raimondii
Gorai.009G252100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 20557661-20562660 Gossypium raimondii
Gorai.009G252100 10.0kb upstream 10.0kb upstream 11801 true Chr09: 20545860-20557660 Gossypium raimondii
Gorai.009G252100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 20545860-20555859 Gossypium raimondii
Gorai.009G252100 10.0kb downstream 10.0kb downstream 11801 true Chr09: 20555860-20567660 Gossypium raimondii
Gorai.009G252100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 20557661-20567660 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123811246 5264 Brassicales-Malvales Singleton cluster - no MSA
124307899 5266 SBM Singleton cluster - no MSA
124157807 5268 Malvidae Singleton cluster - no MSA
123882258 5270 Rosid Singleton cluster - no MSA
123757733 5271 Pentapetalae View MSA
122778752 5272 Eudicot View MSA
122051180 5273 Angiosperm View MSA
121350627 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain