Gene : Gorai.005G194400 G. raimondii v2.1
Defline:  (1 of 7) PTHR11206:SF87 - MATE EFFLUX FAMILY PROTEIN-RELATED Genomic Order:  1944
Name:  ? Gorai.005G194400 Secondary Identifier:  ? PAC:26802636
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G194400 0.5kb upstream 0.5kb upstream 13471 true Chr05: 56439539-56453009 Gossypium raimondii
Gorai.005G194400 0.5kb upstream 0.5kb upstream 500 false Chr05: 56452510-56453009 Gossypium raimondii
Gorai.005G194400 0.5kb downstream 0.5kb downstream 13471 true Chr05: 56439039-56452509 Gossypium raimondii
Gorai.005G194400 0.5kb downstream 0.5kb downstream 500 false Chr05: 56439039-56439538 Gossypium raimondii
Gorai.005G194400 1.0kb upstream 1.0kb upstream 13971 true Chr05: 56439539-56453509 Gossypium raimondii
Gorai.005G194400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 56452510-56453509 Gossypium raimondii
Gorai.005G194400 1.0kb downstream 1.0kb downstream 13971 true Chr05: 56438539-56452509 Gossypium raimondii
Gorai.005G194400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 56438539-56439538 Gossypium raimondii
Gorai.005G194400 2.0kb upstream 2.0kb upstream 14971 true Chr05: 56439539-56454509 Gossypium raimondii
Gorai.005G194400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 56452510-56454509 Gossypium raimondii
Gorai.005G194400 2.0kb downstream 2.0kb downstream 14971 true Chr05: 56437539-56452509 Gossypium raimondii
Gorai.005G194400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 56437539-56439538 Gossypium raimondii
Gorai.005G194400 5.0kb upstream 5.0kb upstream 17971 true Chr05: 56439539-56457509 Gossypium raimondii
Gorai.005G194400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 56452510-56457509 Gossypium raimondii
Gorai.005G194400 5.0kb downstream 5.0kb downstream 17971 true Chr05: 56434539-56452509 Gossypium raimondii
Gorai.005G194400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 56434539-56439538 Gossypium raimondii
Gorai.005G194400 10.0kb upstream 10.0kb upstream 22971 true Chr05: 56439539-56462509 Gossypium raimondii
Gorai.005G194400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 56452510-56462509 Gossypium raimondii
Gorai.005G194400 10.0kb downstream 10.0kb downstream 22971 true Chr05: 56429539-56452509 Gossypium raimondii
Gorai.005G194400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 56429539-56439538 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831370 5264 Brassicales-Malvales View MSA
124349930 5266 SBM View MSA
124254486 5268 Malvidae View MSA
124070136 5270 Rosid View MSA
123747121 5271 Pentapetalae View MSA
122794225 5272 Eudicot View MSA
122042479 5273 Angiosperm View MSA
121350842 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain