Gene : Gorai.005G206500 G. raimondii v2.1
Defline:  (1 of 3) 1.10.9.1 - Plastoquinol--plastocyanin reductase / Cytochrome b6f complex Genomic Order:  2065
Name:  ? Gorai.005G206500 Secondary Identifier:  ? PAC:26805814
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PHOTOALL-PWY Gossypium raimondii pathologic  
Graimondii PWY-101 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G206500 0.5kb upstream 0.5kb upstream 2715 true Chr05: 58548528-58551242 Gossypium raimondii
Gorai.005G206500 0.5kb upstream 0.5kb upstream 500 false Chr05: 58550743-58551242 Gossypium raimondii
Gorai.005G206500 0.5kb downstream 0.5kb downstream 2715 true Chr05: 58548028-58550742 Gossypium raimondii
Gorai.005G206500 0.5kb downstream 0.5kb downstream 500 false Chr05: 58548028-58548527 Gossypium raimondii
Gorai.005G206500 1.0kb upstream 1.0kb upstream 3215 true Chr05: 58548528-58551742 Gossypium raimondii
Gorai.005G206500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 58550743-58551742 Gossypium raimondii
Gorai.005G206500 1.0kb downstream 1.0kb downstream 3215 true Chr05: 58547528-58550742 Gossypium raimondii
Gorai.005G206500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 58547528-58548527 Gossypium raimondii
Gorai.005G206500 2.0kb upstream 2.0kb upstream 4215 true Chr05: 58548528-58552742 Gossypium raimondii
Gorai.005G206500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 58550743-58552742 Gossypium raimondii
Gorai.005G206500 2.0kb downstream 2.0kb downstream 4215 true Chr05: 58546528-58550742 Gossypium raimondii
Gorai.005G206500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 58546528-58548527 Gossypium raimondii
Gorai.005G206500 5.0kb upstream 5.0kb upstream 7215 true Chr05: 58548528-58555742 Gossypium raimondii
Gorai.005G206500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 58550743-58555742 Gossypium raimondii
Gorai.005G206500 5.0kb downstream 5.0kb downstream 7215 true Chr05: 58543528-58550742 Gossypium raimondii
Gorai.005G206500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 58543528-58548527 Gossypium raimondii
Gorai.005G206500 10.0kb upstream 10.0kb upstream 12215 true Chr05: 58548528-58560742 Gossypium raimondii
Gorai.005G206500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 58550743-58560742 Gossypium raimondii
Gorai.005G206500 10.0kb downstream 10.0kb downstream 12215 true Chr05: 58538528-58550742 Gossypium raimondii
Gorai.005G206500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 58538528-58548527 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831988 5264 Brassicales-Malvales View MSA
124337057 5266 SBM View MSA
124239989 5268 Malvidae View MSA
124073060 5270 Rosid View MSA
123737463 5271 Pentapetalae View MSA
122790798 5272 Eudicot View MSA
122045987 5273 Angiosperm View MSA
121343796 5274 Embryophyte View MSA
123424591 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain