Gene : Gorai.009G409200 G. raimondii v2.1
Defline:  (1 of 1) 2.4.99.12 - Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase / Lipid IV(A) KDO transferase Genomic Order:  4092
Name:  ? Gorai.009G409200 Secondary Identifier:  ? PAC:26770307
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii KDOSYN-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.009G409200 0.5kb upstream 0.5kb upstream 12187 true Chr09: 61446235-61458421 Gossypium raimondii
Gorai.009G409200 0.5kb upstream 0.5kb upstream 500 false Chr09: 61446235-61446734 Gossypium raimondii
Gorai.009G409200 0.5kb downstream 0.5kb downstream 12187 true Chr09: 61446735-61458921 Gossypium raimondii
Gorai.009G409200 0.5kb downstream 0.5kb downstream 500 false Chr09: 61458422-61458921 Gossypium raimondii
Gorai.009G409200 1.0kb upstream 1.0kb upstream 12687 true Chr09: 61445735-61458421 Gossypium raimondii
Gorai.009G409200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 61445735-61446734 Gossypium raimondii
Gorai.009G409200 1.0kb downstream 1.0kb downstream 12687 true Chr09: 61446735-61459421 Gossypium raimondii
Gorai.009G409200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 61458422-61459421 Gossypium raimondii
Gorai.009G409200 2.0kb upstream 2.0kb upstream 13687 true Chr09: 61444735-61458421 Gossypium raimondii
Gorai.009G409200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 61444735-61446734 Gossypium raimondii
Gorai.009G409200 2.0kb downstream 2.0kb downstream 13687 true Chr09: 61446735-61460421 Gossypium raimondii
Gorai.009G409200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 61458422-61460421 Gossypium raimondii
Gorai.009G409200 5.0kb upstream 5.0kb upstream 16687 true Chr09: 61441735-61458421 Gossypium raimondii
Gorai.009G409200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 61441735-61446734 Gossypium raimondii
Gorai.009G409200 5.0kb downstream 5.0kb downstream 16687 true Chr09: 61446735-61463421 Gossypium raimondii
Gorai.009G409200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 61458422-61463421 Gossypium raimondii
Gorai.009G409200 10.0kb upstream 10.0kb upstream 21687 true Chr09: 61436735-61458421 Gossypium raimondii
Gorai.009G409200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 61436735-61446734 Gossypium raimondii
Gorai.009G409200 10.0kb downstream 10.0kb downstream 21687 true Chr09: 61446735-61468421 Gossypium raimondii
Gorai.009G409200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 61458422-61468421 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828711 5264 Brassicales-Malvales View MSA
124321549 5266 SBM View MSA
124242327 5268 Malvidae View MSA
124064068 5270 Rosid View MSA
123737995 5271 Pentapetalae View MSA
122793703 5272 Eudicot View MSA
122042607 5273 Angiosperm View MSA
121344444 5274 Embryophyte View MSA
123380045 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain