Gene : Gorai.005G220900 G. raimondii v2.1
Defline:  (1 of 3) PF00656//PF06943 - Caspase domain (Peptidase_C14) // LSD1 zinc finger (zf-LSD1) Genomic Order:  2209
Name:  ? Gorai.005G220900 Secondary Identifier:  ? PAC:26805951
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G220900 0.5kb upstream 0.5kb upstream 2860 true Chr05: 60361840-60364699 Gossypium raimondii
Gorai.005G220900 0.5kb upstream 0.5kb upstream 500 false Chr05: 60361840-60362339 Gossypium raimondii
Gorai.005G220900 0.5kb downstream 0.5kb downstream 2860 true Chr05: 60362340-60365199 Gossypium raimondii
Gorai.005G220900 0.5kb downstream 0.5kb downstream 500 false Chr05: 60364700-60365199 Gossypium raimondii
Gorai.005G220900 1.0kb upstream 1.0kb upstream 3360 true Chr05: 60361340-60364699 Gossypium raimondii
Gorai.005G220900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 60361340-60362339 Gossypium raimondii
Gorai.005G220900 1.0kb downstream 1.0kb downstream 3360 true Chr05: 60362340-60365699 Gossypium raimondii
Gorai.005G220900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 60364700-60365699 Gossypium raimondii
Gorai.005G220900 2.0kb upstream 2.0kb upstream 4360 true Chr05: 60360340-60364699 Gossypium raimondii
Gorai.005G220900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 60360340-60362339 Gossypium raimondii
Gorai.005G220900 2.0kb downstream 2.0kb downstream 4360 true Chr05: 60362340-60366699 Gossypium raimondii
Gorai.005G220900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 60364700-60366699 Gossypium raimondii
Gorai.005G220900 5.0kb upstream 5.0kb upstream 7360 true Chr05: 60357340-60364699 Gossypium raimondii
Gorai.005G220900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 60357340-60362339 Gossypium raimondii
Gorai.005G220900 5.0kb downstream 5.0kb downstream 7360 true Chr05: 60362340-60369699 Gossypium raimondii
Gorai.005G220900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 60364700-60369699 Gossypium raimondii
Gorai.005G220900 10.0kb upstream 10.0kb upstream 12360 true Chr05: 60352340-60364699 Gossypium raimondii
Gorai.005G220900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 60352340-60362339 Gossypium raimondii
Gorai.005G220900 10.0kb downstream 10.0kb downstream 12360 true Chr05: 60362340-60374699 Gossypium raimondii
Gorai.005G220900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 60364700-60374699 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834783 5264 Brassicales-Malvales View MSA
124344945 5266 SBM View MSA
124253694 5268 Malvidae View MSA
124037273 5270 Rosid View MSA
123744103 5271 Pentapetalae View MSA
122795793 5272 Eudicot View MSA
122050099 5273 Angiosperm View MSA
123428899 5275 Viridiplantae View MSA
121348125 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain