Gene : Gorai.010G028500 G. raimondii v2.1
Defline:  (1 of 5) 1.14.13.132//1.14.99.7 - Squalene monooxygenase / Squalene epoxidase Genomic Order:  285
Name:  ? Gorai.010G028500 Secondary Identifier:  ? PAC:26758638
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-2541 Gossypium raimondii pathologic  
Graimondii PWY-5670 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.010G028500 0.5kb upstream 0.5kb upstream 5077 true Chr10: 2346093-2351169 Gossypium raimondii
Gorai.010G028500 0.5kb upstream 0.5kb upstream 500 false Chr10: 2346093-2346592 Gossypium raimondii
Gorai.010G028500 0.5kb downstream 0.5kb downstream 5077 true Chr10: 2346593-2351669 Gossypium raimondii
Gorai.010G028500 0.5kb downstream 0.5kb downstream 500 false Chr10: 2351170-2351669 Gossypium raimondii
Gorai.010G028500 1.0kb upstream 1.0kb upstream 5577 true Chr10: 2345593-2351169 Gossypium raimondii
Gorai.010G028500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 2345593-2346592 Gossypium raimondii
Gorai.010G028500 1.0kb downstream 1.0kb downstream 5577 true Chr10: 2346593-2352169 Gossypium raimondii
Gorai.010G028500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 2351170-2352169 Gossypium raimondii
Gorai.010G028500 2.0kb upstream 2.0kb upstream 6577 true Chr10: 2344593-2351169 Gossypium raimondii
Gorai.010G028500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 2344593-2346592 Gossypium raimondii
Gorai.010G028500 2.0kb downstream 2.0kb downstream 6577 true Chr10: 2346593-2353169 Gossypium raimondii
Gorai.010G028500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 2351170-2353169 Gossypium raimondii
Gorai.010G028500 5.0kb upstream 5.0kb upstream 9577 true Chr10: 2341593-2351169 Gossypium raimondii
Gorai.010G028500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 2341593-2346592 Gossypium raimondii
Gorai.010G028500 5.0kb downstream 5.0kb downstream 9577 true Chr10: 2346593-2356169 Gossypium raimondii
Gorai.010G028500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 2351170-2356169 Gossypium raimondii
Gorai.010G028500 10.0kb upstream 10.0kb upstream 14577 true Chr10: 2336593-2351169 Gossypium raimondii
Gorai.010G028500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 2336593-2346592 Gossypium raimondii
Gorai.010G028500 10.0kb downstream 10.0kb downstream 14577 true Chr10: 2346593-2361169 Gossypium raimondii
Gorai.010G028500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 2351170-2361169 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838211 5264 Brassicales-Malvales View MSA
124342457 5266 SBM View MSA
124254451 5268 Malvidae View MSA
124072398 5270 Rosid View MSA
123747368 5271 Pentapetalae View MSA
122788930 5272 Eudicot View MSA
122042003 5273 Angiosperm View MSA
121344187 5274 Embryophyte View MSA
123428498 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain