Gene : Gorai.005G237200 G. raimondii v2.1
Defline:  (1 of 2) PTHR22849:SF52 - E3 UBIQUITIN-PROTEIN LIGASE PUB24-RELATED Genomic Order:  2372
Name:  ? Gorai.005G237200 Secondary Identifier:  ? PAC:26806314
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G237200 0.5kb upstream 0.5kb upstream 2065 true Chr05: 61883498-61885562 Gossypium raimondii
Gorai.005G237200 0.5kb upstream 0.5kb upstream 500 false Chr05: 61885063-61885562 Gossypium raimondii
Gorai.005G237200 0.5kb downstream 0.5kb downstream 2065 true Chr05: 61882998-61885062 Gossypium raimondii
Gorai.005G237200 0.5kb downstream 0.5kb downstream 500 false Chr05: 61882998-61883497 Gossypium raimondii
Gorai.005G237200 1.0kb upstream 1.0kb upstream 2565 true Chr05: 61883498-61886062 Gossypium raimondii
Gorai.005G237200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 61885063-61886062 Gossypium raimondii
Gorai.005G237200 1.0kb downstream 1.0kb downstream 2565 true Chr05: 61882498-61885062 Gossypium raimondii
Gorai.005G237200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 61882498-61883497 Gossypium raimondii
Gorai.005G237200 2.0kb upstream 2.0kb upstream 3565 true Chr05: 61883498-61887062 Gossypium raimondii
Gorai.005G237200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 61885063-61887062 Gossypium raimondii
Gorai.005G237200 2.0kb downstream 2.0kb downstream 3565 true Chr05: 61881498-61885062 Gossypium raimondii
Gorai.005G237200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 61881498-61883497 Gossypium raimondii
Gorai.005G237200 5.0kb upstream 5.0kb upstream 6565 true Chr05: 61883498-61890062 Gossypium raimondii
Gorai.005G237200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 61885063-61890062 Gossypium raimondii
Gorai.005G237200 5.0kb downstream 5.0kb downstream 6565 true Chr05: 61878498-61885062 Gossypium raimondii
Gorai.005G237200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 61878498-61883497 Gossypium raimondii
Gorai.005G237200 10.0kb upstream 10.0kb upstream 11565 true Chr05: 61883498-61895062 Gossypium raimondii
Gorai.005G237200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 61885063-61895062 Gossypium raimondii
Gorai.005G237200 10.0kb downstream 10.0kb downstream 11565 true Chr05: 61873498-61885062 Gossypium raimondii
Gorai.005G237200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 61873498-61883497 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836099 5264 Brassicales-Malvales View MSA
124342349 5266 SBM View MSA
124246737 5268 Malvidae View MSA
124065727 5270 Rosid View MSA
123740066 5271 Pentapetalae View MSA
122793707 5272 Eudicot View MSA
122045522 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain