Gene : Gorai.010G178000 G. raimondii v2.1
Defline:  (1 of 2) PTHR10314:SF123 - TRYPTOPHAN SYNTHASE BETA CHAIN-LIKE PROTEIN Genomic Order:  1780
Name:  ? Gorai.010G178000 Secondary Identifier:  ? PAC:26757961
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii TRPSYN-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.010G178000 0.5kb upstream 0.5kb upstream 1692 true Chr10: 52268716-52270407 Gossypium raimondii
Gorai.010G178000 0.5kb upstream 0.5kb upstream 500 false Chr10: 52268716-52269215 Gossypium raimondii
Gorai.010G178000 0.5kb downstream 0.5kb downstream 1692 true Chr10: 52269216-52270907 Gossypium raimondii
Gorai.010G178000 0.5kb downstream 0.5kb downstream 500 false Chr10: 52270408-52270907 Gossypium raimondii
Gorai.010G178000 1.0kb upstream 1.0kb upstream 2192 true Chr10: 52268216-52270407 Gossypium raimondii
Gorai.010G178000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 52268216-52269215 Gossypium raimondii
Gorai.010G178000 1.0kb downstream 1.0kb downstream 2192 true Chr10: 52269216-52271407 Gossypium raimondii
Gorai.010G178000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 52270408-52271407 Gossypium raimondii
Gorai.010G178000 2.0kb upstream 2.0kb upstream 3192 true Chr10: 52267216-52270407 Gossypium raimondii
Gorai.010G178000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 52267216-52269215 Gossypium raimondii
Gorai.010G178000 2.0kb downstream 2.0kb downstream 3192 true Chr10: 52269216-52272407 Gossypium raimondii
Gorai.010G178000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 52270408-52272407 Gossypium raimondii
Gorai.010G178000 5.0kb upstream 5.0kb upstream 6192 true Chr10: 52264216-52270407 Gossypium raimondii
Gorai.010G178000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 52264216-52269215 Gossypium raimondii
Gorai.010G178000 5.0kb downstream 5.0kb downstream 6192 true Chr10: 52269216-52275407 Gossypium raimondii
Gorai.010G178000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 52270408-52275407 Gossypium raimondii
Gorai.010G178000 10.0kb upstream 10.0kb upstream 11192 true Chr10: 52259216-52270407 Gossypium raimondii
Gorai.010G178000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 52259216-52269215 Gossypium raimondii
Gorai.010G178000 10.0kb downstream 10.0kb downstream 11192 true Chr10: 52269216-52280407 Gossypium raimondii
Gorai.010G178000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 52270408-52280407 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832912 5264 Brassicales-Malvales View MSA
124344343 5266 SBM View MSA
124250400 5268 Malvidae View MSA
124062384 5270 Rosid View MSA
123745831 5271 Pentapetalae View MSA
122787401 5272 Eudicot View MSA
122044231 5273 Angiosperm View MSA
121344651 5274 Embryophyte View MSA
123423776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain