Gene : Gorai.005G258500 G. raimondii v2.1
Defline:  (1 of 2) PTHR23063:SF2 - PROTEIN ACL-5, ISOFORM A Genomic Order:  2585
Name:  ? Gorai.005G258500 Secondary Identifier:  ? PAC:26803733
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY0-1319 Gossypium raimondii pathologic  
Graimondii PWY4FS-7 Gossypium raimondii pathologic  
Graimondii PWY-7411 Gossypium raimondii pathologic  
Graimondii TRIGLSYN-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G258500 0.5kb upstream 0.5kb upstream 5222 true Chr05: 63450673-63455894 Gossypium raimondii
Gorai.005G258500 0.5kb upstream 0.5kb upstream 500 false Chr05: 63450673-63451172 Gossypium raimondii
Gorai.005G258500 0.5kb downstream 0.5kb downstream 5222 true Chr05: 63451173-63456394 Gossypium raimondii
Gorai.005G258500 0.5kb downstream 0.5kb downstream 500 false Chr05: 63455895-63456394 Gossypium raimondii
Gorai.005G258500 1.0kb upstream 1.0kb upstream 5722 true Chr05: 63450173-63455894 Gossypium raimondii
Gorai.005G258500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 63450173-63451172 Gossypium raimondii
Gorai.005G258500 1.0kb downstream 1.0kb downstream 5722 true Chr05: 63451173-63456894 Gossypium raimondii
Gorai.005G258500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 63455895-63456894 Gossypium raimondii
Gorai.005G258500 2.0kb upstream 2.0kb upstream 6722 true Chr05: 63449173-63455894 Gossypium raimondii
Gorai.005G258500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 63449173-63451172 Gossypium raimondii
Gorai.005G258500 2.0kb downstream 2.0kb downstream 6722 true Chr05: 63451173-63457894 Gossypium raimondii
Gorai.005G258500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 63455895-63457894 Gossypium raimondii
Gorai.005G258500 5.0kb upstream 5.0kb upstream 9722 true Chr05: 63446173-63455894 Gossypium raimondii
Gorai.005G258500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 63446173-63451172 Gossypium raimondii
Gorai.005G258500 5.0kb downstream 5.0kb downstream 9722 true Chr05: 63451173-63460894 Gossypium raimondii
Gorai.005G258500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 63455895-63460894 Gossypium raimondii
Gorai.005G258500 10.0kb upstream 10.0kb upstream 14722 true Chr05: 63441173-63455894 Gossypium raimondii
Gorai.005G258500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 63441173-63451172 Gossypium raimondii
Gorai.005G258500 10.0kb downstream 10.0kb downstream 14722 true Chr05: 63451173-63465894 Gossypium raimondii
Gorai.005G258500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 63455895-63465894 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123807224 5264 Brassicales-Malvales Singleton cluster - no MSA
124304098 5266 SBM Singleton cluster - no MSA
124154681 5268 Malvidae Singleton cluster - no MSA
123879615 5270 Rosid Singleton cluster - no MSA
123751222 5271 Pentapetalae View MSA
122796143 5272 Eudicot View MSA
122045469 5273 Angiosperm View MSA
121344945 5274 Embryophyte View MSA
123427569 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain