Gene : Gorai.006G009400 G. raimondii v2.1
Defline:  (1 of 4) 2.5.1.32 - 15-cis-phytoene synthase / PSase Genomic Order:  94
Name:  ? Gorai.006G009400 Secondary Identifier:  ? PAC:26832202
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii CAROTENOID-PWY Gossypium raimondii pathologic  
Graimondii PWY-6475 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G009400 0.5kb upstream 0.5kb upstream 3567 true Chr06: 2094793-2098359 Gossypium raimondii
Gorai.006G009400 0.5kb upstream 0.5kb upstream 500 false Chr06: 2094793-2095292 Gossypium raimondii
Gorai.006G009400 0.5kb downstream 0.5kb downstream 3567 true Chr06: 2095293-2098859 Gossypium raimondii
Gorai.006G009400 0.5kb downstream 0.5kb downstream 500 false Chr06: 2098360-2098859 Gossypium raimondii
Gorai.006G009400 1.0kb upstream 1.0kb upstream 4067 true Chr06: 2094293-2098359 Gossypium raimondii
Gorai.006G009400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 2094293-2095292 Gossypium raimondii
Gorai.006G009400 1.0kb downstream 1.0kb downstream 4067 true Chr06: 2095293-2099359 Gossypium raimondii
Gorai.006G009400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 2098360-2099359 Gossypium raimondii
Gorai.006G009400 2.0kb upstream 2.0kb upstream 5067 true Chr06: 2093293-2098359 Gossypium raimondii
Gorai.006G009400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 2093293-2095292 Gossypium raimondii
Gorai.006G009400 2.0kb downstream 2.0kb downstream 5067 true Chr06: 2095293-2100359 Gossypium raimondii
Gorai.006G009400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 2098360-2100359 Gossypium raimondii
Gorai.006G009400 5.0kb upstream 5.0kb upstream 8067 true Chr06: 2090293-2098359 Gossypium raimondii
Gorai.006G009400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 2090293-2095292 Gossypium raimondii
Gorai.006G009400 5.0kb downstream 5.0kb downstream 8067 true Chr06: 2095293-2103359 Gossypium raimondii
Gorai.006G009400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 2098360-2103359 Gossypium raimondii
Gorai.006G009400 10.0kb upstream 10.0kb upstream 13067 true Chr06: 2085293-2098359 Gossypium raimondii
Gorai.006G009400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 2085293-2095292 Gossypium raimondii
Gorai.006G009400 10.0kb downstream 10.0kb downstream 13067 true Chr06: 2095293-2108359 Gossypium raimondii
Gorai.006G009400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 2098360-2108359 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
123825662 5264 Brassicales-Malvales View MSA
124320701 5266 SBM View MSA
124251202 5268 Malvidae View MSA
124069921 5270 Rosid View MSA
123743557 5271 Pentapetalae View MSA
122795955 5272 Eudicot View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain