Gene : Gorai.006G103500 G. raimondii v2.1
Defline:  (1 of 3) PTHR12616 - VACUOLAR PROTEIN SORTING VPS41 Genomic Order:  1035
Name:  ? Gorai.006G103500 Secondary Identifier:  ? PAC:26830454
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G103500 0.5kb upstream 0.5kb upstream 8581 true Chr06: 34498281-34506861 Gossypium raimondii
Gorai.006G103500 0.5kb upstream 0.5kb upstream 500 false Chr06: 34506362-34506861 Gossypium raimondii
Gorai.006G103500 0.5kb downstream 0.5kb downstream 8581 true Chr06: 34497781-34506361 Gossypium raimondii
Gorai.006G103500 0.5kb downstream 0.5kb downstream 500 false Chr06: 34497781-34498280 Gossypium raimondii
Gorai.006G103500 1.0kb upstream 1.0kb upstream 9081 true Chr06: 34498281-34507361 Gossypium raimondii
Gorai.006G103500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 34506362-34507361 Gossypium raimondii
Gorai.006G103500 1.0kb downstream 1.0kb downstream 9081 true Chr06: 34497281-34506361 Gossypium raimondii
Gorai.006G103500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 34497281-34498280 Gossypium raimondii
Gorai.006G103500 2.0kb upstream 2.0kb upstream 10081 true Chr06: 34498281-34508361 Gossypium raimondii
Gorai.006G103500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 34506362-34508361 Gossypium raimondii
Gorai.006G103500 2.0kb downstream 2.0kb downstream 10081 true Chr06: 34496281-34506361 Gossypium raimondii
Gorai.006G103500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 34496281-34498280 Gossypium raimondii
Gorai.006G103500 5.0kb upstream 5.0kb upstream 13081 true Chr06: 34498281-34511361 Gossypium raimondii
Gorai.006G103500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 34506362-34511361 Gossypium raimondii
Gorai.006G103500 5.0kb downstream 5.0kb downstream 13081 true Chr06: 34493281-34506361 Gossypium raimondii
Gorai.006G103500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 34493281-34498280 Gossypium raimondii
Gorai.006G103500 10.0kb upstream 10.0kb upstream 18081 true Chr06: 34498281-34516361 Gossypium raimondii
Gorai.006G103500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 34506362-34516361 Gossypium raimondii
Gorai.006G103500 10.0kb downstream 10.0kb downstream 18081 true Chr06: 34488281-34506361 Gossypium raimondii
Gorai.006G103500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 34488281-34498280 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121514650 5273 Angiosperm Singleton cluster - no MSA
123807799 5264 Brassicales-Malvales Singleton cluster - no MSA
124304653 5266 SBM Singleton cluster - no MSA
124155120 5268 Malvidae Singleton cluster - no MSA
123879981 5270 Rosid Singleton cluster - no MSA
123463185 5271 Pentapetalae Singleton cluster - no MSA
122498521 5272 Eudicot Singleton cluster - no MSA
120787590 5274 Embryophyte Singleton cluster - no MSA
122829361 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain