Gene : Gorai.006G201600 G. raimondii v2.1
Defline:  (1 of 2) PTHR12526:SF17 - STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC Genomic Order:  2016
Name:  ? Gorai.006G201600 Secondary Identifier:  ? PAC:26830870
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii GLYCOGENSYNTH-PWY Gossypium raimondii pathologic  
Graimondii PWY-622 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G201600 0.5kb upstream 0.5kb upstream 5870 true Chr06: 45831862-45837731 Gossypium raimondii
Gorai.006G201600 0.5kb upstream 0.5kb upstream 500 false Chr06: 45831862-45832361 Gossypium raimondii
Gorai.006G201600 0.5kb downstream 0.5kb downstream 5870 true Chr06: 45832362-45838231 Gossypium raimondii
Gorai.006G201600 0.5kb downstream 0.5kb downstream 500 false Chr06: 45837732-45838231 Gossypium raimondii
Gorai.006G201600 1.0kb upstream 1.0kb upstream 6370 true Chr06: 45831362-45837731 Gossypium raimondii
Gorai.006G201600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 45831362-45832361 Gossypium raimondii
Gorai.006G201600 1.0kb downstream 1.0kb downstream 6370 true Chr06: 45832362-45838731 Gossypium raimondii
Gorai.006G201600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 45837732-45838731 Gossypium raimondii
Gorai.006G201600 2.0kb upstream 2.0kb upstream 7370 true Chr06: 45830362-45837731 Gossypium raimondii
Gorai.006G201600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 45830362-45832361 Gossypium raimondii
Gorai.006G201600 2.0kb downstream 2.0kb downstream 7370 true Chr06: 45832362-45839731 Gossypium raimondii
Gorai.006G201600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 45837732-45839731 Gossypium raimondii
Gorai.006G201600 5.0kb upstream 5.0kb upstream 10370 true Chr06: 45827362-45837731 Gossypium raimondii
Gorai.006G201600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 45827362-45832361 Gossypium raimondii
Gorai.006G201600 5.0kb downstream 5.0kb downstream 10370 true Chr06: 45832362-45842731 Gossypium raimondii
Gorai.006G201600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 45837732-45842731 Gossypium raimondii
Gorai.006G201600 10.0kb upstream 10.0kb upstream 15370 true Chr06: 45822362-45837731 Gossypium raimondii
Gorai.006G201600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 45822362-45832361 Gossypium raimondii
Gorai.006G201600 10.0kb downstream 10.0kb downstream 15370 true Chr06: 45832362-45847731 Gossypium raimondii
Gorai.006G201600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 45837732-45847731 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838245 5264 Brassicales-Malvales View MSA
124341785 5266 SBM View MSA
124239444 5268 Malvidae View MSA
124060940 5270 Rosid View MSA
123737274 5271 Pentapetalae View MSA
122791286 5272 Eudicot View MSA
122042634 5273 Angiosperm View MSA
121343835 5274 Embryophyte View MSA
123426751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain