Gene : Gorai.006G252900 G. raimondii v2.1
Defline:  (1 of 2) PTHR31008:SF0 - COP1-INTERACTING PROTEIN-LIKE PROTEIN Genomic Order:  2529
Name:  ? Gorai.006G252900 Secondary Identifier:  ? PAC:26829531
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G252900 0.5kb upstream 0.5kb upstream 7639 true Chr06: 49602180-49609818 Gossypium raimondii
Gorai.006G252900 0.5kb upstream 0.5kb upstream 500 false Chr06: 49609319-49609818 Gossypium raimondii
Gorai.006G252900 0.5kb downstream 0.5kb downstream 7639 true Chr06: 49601680-49609318 Gossypium raimondii
Gorai.006G252900 0.5kb downstream 0.5kb downstream 500 false Chr06: 49601680-49602179 Gossypium raimondii
Gorai.006G252900 1.0kb upstream 1.0kb upstream 8139 true Chr06: 49602180-49610318 Gossypium raimondii
Gorai.006G252900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 49609319-49610318 Gossypium raimondii
Gorai.006G252900 1.0kb downstream 1.0kb downstream 8139 true Chr06: 49601180-49609318 Gossypium raimondii
Gorai.006G252900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 49601180-49602179 Gossypium raimondii
Gorai.006G252900 2.0kb upstream 2.0kb upstream 9139 true Chr06: 49602180-49611318 Gossypium raimondii
Gorai.006G252900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 49609319-49611318 Gossypium raimondii
Gorai.006G252900 2.0kb downstream 2.0kb downstream 9139 true Chr06: 49600180-49609318 Gossypium raimondii
Gorai.006G252900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 49600180-49602179 Gossypium raimondii
Gorai.006G252900 5.0kb upstream 5.0kb upstream 12139 true Chr06: 49602180-49614318 Gossypium raimondii
Gorai.006G252900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 49609319-49614318 Gossypium raimondii
Gorai.006G252900 5.0kb downstream 5.0kb downstream 12139 true Chr06: 49597180-49609318 Gossypium raimondii
Gorai.006G252900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 49597180-49602179 Gossypium raimondii
Gorai.006G252900 10.0kb upstream 10.0kb upstream 17139 true Chr06: 49602180-49619318 Gossypium raimondii
Gorai.006G252900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 49609319-49619318 Gossypium raimondii
Gorai.006G252900 10.0kb downstream 10.0kb downstream 17139 true Chr06: 49592180-49609318 Gossypium raimondii
Gorai.006G252900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 49592180-49602179 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840807 5264 Brassicales-Malvales View MSA
124345172 5266 SBM View MSA
124253740 5268 Malvidae View MSA
124060773 5270 Rosid View MSA
123744546 5271 Pentapetalae View MSA
122797843 5272 Eudicot View MSA
122048758 5273 Angiosperm View MSA
121350762 5274 Embryophyte View MSA
123381879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain