Gene : Gorai.006G075100 G. raimondii v2.1
Defline:  (1 of 4) 1.1.1.25 - Shikimate dehydrogenase / Shikimate:NADP(+) oxidoreductase Genomic Order:  751
Name:  ? Gorai.006G075100 Secondary Identifier:  ? PAC:26829939
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii ARO-PWY Gossypium raimondii pathologic  
Graimondii PWY-6163 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G075100 0.5kb upstream 0.5kb upstream 5084 true Chr06: 29709069-29714152 Gossypium raimondii
Gorai.006G075100 0.5kb upstream 0.5kb upstream 500 false Chr06: 29713653-29714152 Gossypium raimondii
Gorai.006G075100 0.5kb downstream 0.5kb downstream 5084 true Chr06: 29708569-29713652 Gossypium raimondii
Gorai.006G075100 0.5kb downstream 0.5kb downstream 500 false Chr06: 29708569-29709068 Gossypium raimondii
Gorai.006G075100 1.0kb upstream 1.0kb upstream 5584 true Chr06: 29709069-29714652 Gossypium raimondii
Gorai.006G075100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 29713653-29714652 Gossypium raimondii
Gorai.006G075100 1.0kb downstream 1.0kb downstream 5584 true Chr06: 29708069-29713652 Gossypium raimondii
Gorai.006G075100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 29708069-29709068 Gossypium raimondii
Gorai.006G075100 2.0kb upstream 2.0kb upstream 6584 true Chr06: 29709069-29715652 Gossypium raimondii
Gorai.006G075100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 29713653-29715652 Gossypium raimondii
Gorai.006G075100 2.0kb downstream 2.0kb downstream 6584 true Chr06: 29707069-29713652 Gossypium raimondii
Gorai.006G075100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 29707069-29709068 Gossypium raimondii
Gorai.006G075100 5.0kb upstream 5.0kb upstream 9584 true Chr06: 29709069-29718652 Gossypium raimondii
Gorai.006G075100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 29713653-29718652 Gossypium raimondii
Gorai.006G075100 5.0kb downstream 5.0kb downstream 9584 true Chr06: 29704069-29713652 Gossypium raimondii
Gorai.006G075100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 29704069-29709068 Gossypium raimondii
Gorai.006G075100 10.0kb upstream 10.0kb upstream 14584 true Chr06: 29709069-29723652 Gossypium raimondii
Gorai.006G075100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 29713653-29723652 Gossypium raimondii
Gorai.006G075100 10.0kb downstream 10.0kb downstream 14584 true Chr06: 29699069-29713652 Gossypium raimondii
Gorai.006G075100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 29699069-29709068 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830471 5264 Brassicales-Malvales View MSA
124341830 5266 SBM View MSA
124242776 5268 Malvidae View MSA
124068153 5270 Rosid View MSA
123743031 5271 Pentapetalae View MSA
122788487 5272 Eudicot View MSA
122045026 5273 Angiosperm View MSA
121345779 5274 Embryophyte View MSA
123427556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain