Gene : Gorai.006G113300 G. raimondii v2.1
Defline:  (1 of 2) 5.3.99.9 - Neoxanthin synthase / NSY Genomic Order:  1133
Name:  ? Gorai.006G113300 Secondary Identifier:  ? PAC:26833307
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii CAROTENOID-PWY Gossypium raimondii pathologic  
Graimondii PWY-5174 Gossypium raimondii pathologic  
Graimondii PWY-5943 Gossypium raimondii pathologic  
Graimondii PWY-5947 Gossypium raimondii pathologic  
Graimondii PWY-6809 Gossypium raimondii pathologic  
Graimondii PWY-695 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G113300 0.5kb upstream 0.5kb upstream 2468 true Chr06: 36131435-36133902 Gossypium raimondii
Gorai.006G113300 0.5kb upstream 0.5kb upstream 500 false Chr06: 36131435-36131934 Gossypium raimondii
Gorai.006G113300 0.5kb downstream 0.5kb downstream 2468 true Chr06: 36131935-36134402 Gossypium raimondii
Gorai.006G113300 0.5kb downstream 0.5kb downstream 500 false Chr06: 36133903-36134402 Gossypium raimondii
Gorai.006G113300 1.0kb upstream 1.0kb upstream 2968 true Chr06: 36130935-36133902 Gossypium raimondii
Gorai.006G113300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 36130935-36131934 Gossypium raimondii
Gorai.006G113300 1.0kb downstream 1.0kb downstream 2968 true Chr06: 36131935-36134902 Gossypium raimondii
Gorai.006G113300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 36133903-36134902 Gossypium raimondii
Gorai.006G113300 2.0kb upstream 2.0kb upstream 3968 true Chr06: 36129935-36133902 Gossypium raimondii
Gorai.006G113300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 36129935-36131934 Gossypium raimondii
Gorai.006G113300 2.0kb downstream 2.0kb downstream 3968 true Chr06: 36131935-36135902 Gossypium raimondii
Gorai.006G113300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 36133903-36135902 Gossypium raimondii
Gorai.006G113300 5.0kb upstream 5.0kb upstream 6968 true Chr06: 36126935-36133902 Gossypium raimondii
Gorai.006G113300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 36126935-36131934 Gossypium raimondii
Gorai.006G113300 5.0kb downstream 5.0kb downstream 6968 true Chr06: 36131935-36138902 Gossypium raimondii
Gorai.006G113300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 36133903-36138902 Gossypium raimondii
Gorai.006G113300 10.0kb upstream 10.0kb upstream 11968 true Chr06: 36121935-36133902 Gossypium raimondii
Gorai.006G113300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 36121935-36131934 Gossypium raimondii
Gorai.006G113300 10.0kb downstream 10.0kb downstream 11968 true Chr06: 36131935-36143902 Gossypium raimondii
Gorai.006G113300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 36133903-36143902 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824309 5264 Brassicales-Malvales View MSA
124348925 5266 SBM View MSA
124246200 5268 Malvidae View MSA
124070716 5270 Rosid View MSA
123749598 5271 Pentapetalae View MSA
122795342 5272 Eudicot View MSA
122048987 5273 Angiosperm View MSA
121311196 5274 Embryophyte View MSA
123348524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain