Gene : Gorai.006G214800 G. raimondii v2.1
Defline:  (1 of 6) PTHR23084:SF156 - RADIAL SPOKE HEAD 10 HOMOLOG B2 Genomic Order:  2148
Name:  ? Gorai.006G214800 Secondary Identifier:  ? PAC:26829052
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6351 Gossypium raimondii pathologic  
Graimondii PWY-6352 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G214800 0.5kb upstream 0.5kb upstream 2877 true Chr06: 46837572-46840448 Gossypium raimondii
Gorai.006G214800 0.5kb upstream 0.5kb upstream 500 false Chr06: 46837572-46838071 Gossypium raimondii
Gorai.006G214800 0.5kb downstream 0.5kb downstream 2877 true Chr06: 46838072-46840948 Gossypium raimondii
Gorai.006G214800 0.5kb downstream 0.5kb downstream 500 false Chr06: 46840449-46840948 Gossypium raimondii
Gorai.006G214800 1.0kb upstream 1.0kb upstream 3377 true Chr06: 46837072-46840448 Gossypium raimondii
Gorai.006G214800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 46837072-46838071 Gossypium raimondii
Gorai.006G214800 1.0kb downstream 1.0kb downstream 3377 true Chr06: 46838072-46841448 Gossypium raimondii
Gorai.006G214800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 46840449-46841448 Gossypium raimondii
Gorai.006G214800 2.0kb upstream 2.0kb upstream 4377 true Chr06: 46836072-46840448 Gossypium raimondii
Gorai.006G214800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 46836072-46838071 Gossypium raimondii
Gorai.006G214800 2.0kb downstream 2.0kb downstream 4377 true Chr06: 46838072-46842448 Gossypium raimondii
Gorai.006G214800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 46840449-46842448 Gossypium raimondii
Gorai.006G214800 5.0kb upstream 5.0kb upstream 7377 true Chr06: 46833072-46840448 Gossypium raimondii
Gorai.006G214800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 46833072-46838071 Gossypium raimondii
Gorai.006G214800 5.0kb downstream 5.0kb downstream 7377 true Chr06: 46838072-46845448 Gossypium raimondii
Gorai.006G214800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 46840449-46845448 Gossypium raimondii
Gorai.006G214800 10.0kb upstream 10.0kb upstream 12377 true Chr06: 46828072-46840448 Gossypium raimondii
Gorai.006G214800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 46828072-46838071 Gossypium raimondii
Gorai.006G214800 10.0kb downstream 10.0kb downstream 12377 true Chr06: 46838072-46850448 Gossypium raimondii
Gorai.006G214800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 46840449-46850448 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123807619 5264 Brassicales-Malvales Singleton cluster - no MSA
124304480 5266 SBM Singleton cluster - no MSA
124254332 5268 Malvidae View MSA
124068935 5270 Rosid View MSA
123741886 5271 Pentapetalae View MSA
122788830 5272 Eudicot View MSA
122047970 5273 Angiosperm View MSA
121346800 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain