Gene : Gorai.006G148900 G. raimondii v2.1
Defline:  (1 of 3) PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Genomic Order:  1489
Name:  ? Gorai.006G148900 Secondary Identifier:  ? PAC:26833459
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G148900 0.5kb upstream 0.5kb upstream 2332 true Chr06: 40731715-40734046 Gossypium raimondii
Gorai.006G148900 0.5kb upstream 0.5kb upstream 500 false Chr06: 40733547-40734046 Gossypium raimondii
Gorai.006G148900 0.5kb downstream 0.5kb downstream 2332 true Chr06: 40731215-40733546 Gossypium raimondii
Gorai.006G148900 0.5kb downstream 0.5kb downstream 500 false Chr06: 40731215-40731714 Gossypium raimondii
Gorai.006G148900 1.0kb upstream 1.0kb upstream 2832 true Chr06: 40731715-40734546 Gossypium raimondii
Gorai.006G148900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 40733547-40734546 Gossypium raimondii
Gorai.006G148900 1.0kb downstream 1.0kb downstream 2832 true Chr06: 40730715-40733546 Gossypium raimondii
Gorai.006G148900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 40730715-40731714 Gossypium raimondii
Gorai.006G148900 2.0kb upstream 2.0kb upstream 3832 true Chr06: 40731715-40735546 Gossypium raimondii
Gorai.006G148900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 40733547-40735546 Gossypium raimondii
Gorai.006G148900 2.0kb downstream 2.0kb downstream 3832 true Chr06: 40729715-40733546 Gossypium raimondii
Gorai.006G148900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 40729715-40731714 Gossypium raimondii
Gorai.006G148900 5.0kb upstream 5.0kb upstream 6832 true Chr06: 40731715-40738546 Gossypium raimondii
Gorai.006G148900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 40733547-40738546 Gossypium raimondii
Gorai.006G148900 5.0kb downstream 5.0kb downstream 6832 true Chr06: 40726715-40733546 Gossypium raimondii
Gorai.006G148900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 40726715-40731714 Gossypium raimondii
Gorai.006G148900 10.0kb upstream 10.0kb upstream 11832 true Chr06: 40731715-40743546 Gossypium raimondii
Gorai.006G148900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 40733547-40743546 Gossypium raimondii
Gorai.006G148900 10.0kb downstream 10.0kb downstream 11832 true Chr06: 40721715-40733546 Gossypium raimondii
Gorai.006G148900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 40721715-40731714 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837010 5264 Brassicales-Malvales View MSA
124350441 5266 SBM View MSA
124240092 5268 Malvidae View MSA
124068371 5270 Rosid View MSA
123752134 5271 Pentapetalae View MSA
122795209 5272 Eudicot View MSA
122048631 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain