Gene : Gorai.006G082100 G. raimondii v2.1
Defline:  (1 of 1) PF00348//PF17035 - Polyprenyl synthetase (polyprenyl_synt) // Bromodomain extra-terminal - transcription regulation (BET) Genomic Order:  821
Name:  ? Gorai.006G082100 Secondary Identifier:  ? PAC:26831679
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6520 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G082100 0.5kb upstream 0.5kb upstream 3302 true Chr06: 31214762-31218063 Gossypium raimondii
Gorai.006G082100 0.5kb upstream 0.5kb upstream 500 false Chr06: 31217564-31218063 Gossypium raimondii
Gorai.006G082100 0.5kb downstream 0.5kb downstream 3302 true Chr06: 31214262-31217563 Gossypium raimondii
Gorai.006G082100 0.5kb downstream 0.5kb downstream 500 false Chr06: 31214262-31214761 Gossypium raimondii
Gorai.006G082100 1.0kb upstream 1.0kb upstream 3802 true Chr06: 31214762-31218563 Gossypium raimondii
Gorai.006G082100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 31217564-31218563 Gossypium raimondii
Gorai.006G082100 1.0kb downstream 1.0kb downstream 3802 true Chr06: 31213762-31217563 Gossypium raimondii
Gorai.006G082100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 31213762-31214761 Gossypium raimondii
Gorai.006G082100 2.0kb upstream 2.0kb upstream 4802 true Chr06: 31214762-31219563 Gossypium raimondii
Gorai.006G082100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 31217564-31219563 Gossypium raimondii
Gorai.006G082100 2.0kb downstream 2.0kb downstream 4802 true Chr06: 31212762-31217563 Gossypium raimondii
Gorai.006G082100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 31212762-31214761 Gossypium raimondii
Gorai.006G082100 5.0kb upstream 5.0kb upstream 7802 true Chr06: 31214762-31222563 Gossypium raimondii
Gorai.006G082100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 31217564-31222563 Gossypium raimondii
Gorai.006G082100 5.0kb downstream 5.0kb downstream 7802 true Chr06: 31209762-31217563 Gossypium raimondii
Gorai.006G082100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 31209762-31214761 Gossypium raimondii
Gorai.006G082100 10.0kb upstream 10.0kb upstream 12802 true Chr06: 31214762-31227563 Gossypium raimondii
Gorai.006G082100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 31217564-31227563 Gossypium raimondii
Gorai.006G082100 10.0kb downstream 10.0kb downstream 12802 true Chr06: 31204762-31217563 Gossypium raimondii
Gorai.006G082100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 31204762-31214761 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123807965 5264 Brassicales-Malvales Singleton cluster - no MSA
124304807 5266 SBM Singleton cluster - no MSA
124155248 5268 Malvidae Singleton cluster - no MSA
124051358 5270 Rosid View MSA
123745518 5271 Pentapetalae View MSA
122795597 5272 Eudicot View MSA
122051071 5273 Angiosperm View MSA
121348382 5274 Embryophyte View MSA
123424390 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain