Gene : Gorai.006G181100 G. raimondii v2.1
Defline:  (1 of 1) PTHR10920:SF12 - TRNA (CYTIDINE(32)/GUANOSINE(34)-2'-O)-METHYLTRANSFERASE-RELATED Genomic Order:  1811
Name:  ? Gorai.006G181100 Secondary Identifier:  ? PAC:26834011
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6829 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G181100 0.5kb upstream 0.5kb upstream 4148 true Chr06: 43851222-43855369 Gossypium raimondii
Gorai.006G181100 0.5kb upstream 0.5kb upstream 500 false Chr06: 43854870-43855369 Gossypium raimondii
Gorai.006G181100 0.5kb downstream 0.5kb downstream 4148 true Chr06: 43850722-43854869 Gossypium raimondii
Gorai.006G181100 0.5kb downstream 0.5kb downstream 500 false Chr06: 43850722-43851221 Gossypium raimondii
Gorai.006G181100 1.0kb upstream 1.0kb upstream 4648 true Chr06: 43851222-43855869 Gossypium raimondii
Gorai.006G181100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 43854870-43855869 Gossypium raimondii
Gorai.006G181100 1.0kb downstream 1.0kb downstream 4648 true Chr06: 43850222-43854869 Gossypium raimondii
Gorai.006G181100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 43850222-43851221 Gossypium raimondii
Gorai.006G181100 2.0kb upstream 2.0kb upstream 5648 true Chr06: 43851222-43856869 Gossypium raimondii
Gorai.006G181100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 43854870-43856869 Gossypium raimondii
Gorai.006G181100 2.0kb downstream 2.0kb downstream 5648 true Chr06: 43849222-43854869 Gossypium raimondii
Gorai.006G181100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 43849222-43851221 Gossypium raimondii
Gorai.006G181100 5.0kb upstream 5.0kb upstream 8648 true Chr06: 43851222-43859869 Gossypium raimondii
Gorai.006G181100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 43854870-43859869 Gossypium raimondii
Gorai.006G181100 5.0kb downstream 5.0kb downstream 8648 true Chr06: 43846222-43854869 Gossypium raimondii
Gorai.006G181100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 43846222-43851221 Gossypium raimondii
Gorai.006G181100 10.0kb upstream 10.0kb upstream 13648 true Chr06: 43851222-43864869 Gossypium raimondii
Gorai.006G181100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 43854870-43864869 Gossypium raimondii
Gorai.006G181100 10.0kb downstream 10.0kb downstream 13648 true Chr06: 43841222-43854869 Gossypium raimondii
Gorai.006G181100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 43841222-43851221 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831274 5264 Brassicales-Malvales View MSA
124345014 5266 SBM View MSA
124239012 5268 Malvidae View MSA
124067188 5270 Rosid View MSA
123742065 5271 Pentapetalae View MSA
122791552 5272 Eudicot View MSA
122044785 5273 Angiosperm View MSA
121347520 5274 Embryophyte View MSA
123424894 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain