Gene : Gorai.006G142500 G. raimondii v2.1
Defline:  (1 of 3) PTHR33493:SF2 - LATE EMBRYOGENESIS ABUNDANT PROTEIN 4-5 Genomic Order:  1425
Name:  ? Gorai.006G142500 Secondary Identifier:  ? PAC:26829982
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G142500 0.5kb upstream 0.5kb upstream 1438 true Chr06: 40046071-40047508 Gossypium raimondii
Gorai.006G142500 0.5kb upstream 0.5kb upstream 500 false Chr06: 40047009-40047508 Gossypium raimondii
Gorai.006G142500 0.5kb downstream 0.5kb downstream 1438 true Chr06: 40045571-40047008 Gossypium raimondii
Gorai.006G142500 0.5kb downstream 0.5kb downstream 500 false Chr06: 40045571-40046070 Gossypium raimondii
Gorai.006G142500 1.0kb upstream 1.0kb upstream 1938 true Chr06: 40046071-40048008 Gossypium raimondii
Gorai.006G142500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 40047009-40048008 Gossypium raimondii
Gorai.006G142500 1.0kb downstream 1.0kb downstream 1938 true Chr06: 40045071-40047008 Gossypium raimondii
Gorai.006G142500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 40045071-40046070 Gossypium raimondii
Gorai.006G142500 2.0kb upstream 2.0kb upstream 2938 true Chr06: 40046071-40049008 Gossypium raimondii
Gorai.006G142500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 40047009-40049008 Gossypium raimondii
Gorai.006G142500 2.0kb downstream 2.0kb downstream 2938 true Chr06: 40044071-40047008 Gossypium raimondii
Gorai.006G142500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 40044071-40046070 Gossypium raimondii
Gorai.006G142500 5.0kb upstream 5.0kb upstream 5938 true Chr06: 40046071-40052008 Gossypium raimondii
Gorai.006G142500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 40047009-40052008 Gossypium raimondii
Gorai.006G142500 5.0kb downstream 5.0kb downstream 5938 true Chr06: 40041071-40047008 Gossypium raimondii
Gorai.006G142500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 40041071-40046070 Gossypium raimondii
Gorai.006G142500 10.0kb upstream 10.0kb upstream 10938 true Chr06: 40046071-40057008 Gossypium raimondii
Gorai.006G142500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 40047009-40057008 Gossypium raimondii
Gorai.006G142500 10.0kb downstream 10.0kb downstream 10938 true Chr06: 40036071-40047008 Gossypium raimondii
Gorai.006G142500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 40036071-40046070 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123807745 5264 Brassicales-Malvales Singleton cluster - no MSA
124304600 5266 SBM Singleton cluster - no MSA
124155076 5268 Malvidae Singleton cluster - no MSA
124073958 5270 Rosid View MSA
123749159 5271 Pentapetalae View MSA
122794913 5272 Eudicot View MSA
122046443 5273 Angiosperm View MSA
121349982 5274 Embryophyte View MSA
123381528 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain