Gene : Gorai.006G232200 G. raimondii v2.1
Defline:  (1 of 1) PTHR10314:SF110 - CYSTEINE SYNTHASE Genomic Order:  2322
Name:  ? Gorai.006G232200 Secondary Identifier:  ? PAC:26832535
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii CYSTSYN-PWY Gossypium raimondii pathologic  
Graimondii PWY-6936 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.006G232200 0.5kb upstream 0.5kb upstream 5546 true Chr06: 48129778-48135323 Gossypium raimondii
Gorai.006G232200 0.5kb upstream 0.5kb upstream 500 false Chr06: 48134824-48135323 Gossypium raimondii
Gorai.006G232200 0.5kb downstream 0.5kb downstream 5546 true Chr06: 48129278-48134823 Gossypium raimondii
Gorai.006G232200 0.5kb downstream 0.5kb downstream 500 false Chr06: 48129278-48129777 Gossypium raimondii
Gorai.006G232200 1.0kb upstream 1.0kb upstream 6046 true Chr06: 48129778-48135823 Gossypium raimondii
Gorai.006G232200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 48134824-48135823 Gossypium raimondii
Gorai.006G232200 1.0kb downstream 1.0kb downstream 6046 true Chr06: 48128778-48134823 Gossypium raimondii
Gorai.006G232200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 48128778-48129777 Gossypium raimondii
Gorai.006G232200 2.0kb upstream 2.0kb upstream 7046 true Chr06: 48129778-48136823 Gossypium raimondii
Gorai.006G232200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 48134824-48136823 Gossypium raimondii
Gorai.006G232200 2.0kb downstream 2.0kb downstream 7046 true Chr06: 48127778-48134823 Gossypium raimondii
Gorai.006G232200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 48127778-48129777 Gossypium raimondii
Gorai.006G232200 5.0kb upstream 5.0kb upstream 10046 true Chr06: 48129778-48139823 Gossypium raimondii
Gorai.006G232200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 48134824-48139823 Gossypium raimondii
Gorai.006G232200 5.0kb downstream 5.0kb downstream 10046 true Chr06: 48124778-48134823 Gossypium raimondii
Gorai.006G232200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 48124778-48129777 Gossypium raimondii
Gorai.006G232200 10.0kb upstream 10.0kb upstream 15046 true Chr06: 48129778-48144823 Gossypium raimondii
Gorai.006G232200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 48134824-48144823 Gossypium raimondii
Gorai.006G232200 10.0kb downstream 10.0kb downstream 15046 true Chr06: 48119778-48134823 Gossypium raimondii
Gorai.006G232200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 48119778-48129777 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838792 5264 Brassicales-Malvales View MSA
124340029 5266 SBM View MSA
124241185 5268 Malvidae View MSA
124068226 5270 Rosid View MSA
123737517 5271 Pentapetalae View MSA
122787269 5272 Eudicot View MSA
122042312 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain