Gene : Gorai.007G120000 G. raimondii v2.1
Defline:  (1 of 2) PTHR31375:SF43 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Genomic Order:  1200
Name:  ? Gorai.007G120000 Secondary Identifier:  ? PAC:26780959
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-1081 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.007G120000 0.5kb upstream 0.5kb upstream 3217 true Chr07: 9433002-9436218 Gossypium raimondii
Gorai.007G120000 0.5kb upstream 0.5kb upstream 500 false Chr07: 9433002-9433501 Gossypium raimondii
Gorai.007G120000 0.5kb downstream 0.5kb downstream 3217 true Chr07: 9433502-9436718 Gossypium raimondii
Gorai.007G120000 0.5kb downstream 0.5kb downstream 500 false Chr07: 9436219-9436718 Gossypium raimondii
Gorai.007G120000 1.0kb upstream 1.0kb upstream 3717 true Chr07: 9432502-9436218 Gossypium raimondii
Gorai.007G120000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 9432502-9433501 Gossypium raimondii
Gorai.007G120000 1.0kb downstream 1.0kb downstream 3717 true Chr07: 9433502-9437218 Gossypium raimondii
Gorai.007G120000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 9436219-9437218 Gossypium raimondii
Gorai.007G120000 2.0kb upstream 2.0kb upstream 4717 true Chr07: 9431502-9436218 Gossypium raimondii
Gorai.007G120000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 9431502-9433501 Gossypium raimondii
Gorai.007G120000 2.0kb downstream 2.0kb downstream 4717 true Chr07: 9433502-9438218 Gossypium raimondii
Gorai.007G120000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 9436219-9438218 Gossypium raimondii
Gorai.007G120000 5.0kb upstream 5.0kb upstream 7717 true Chr07: 9428502-9436218 Gossypium raimondii
Gorai.007G120000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 9428502-9433501 Gossypium raimondii
Gorai.007G120000 5.0kb downstream 5.0kb downstream 7717 true Chr07: 9433502-9441218 Gossypium raimondii
Gorai.007G120000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 9436219-9441218 Gossypium raimondii
Gorai.007G120000 10.0kb upstream 10.0kb upstream 12717 true Chr07: 9423502-9436218 Gossypium raimondii
Gorai.007G120000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 9423502-9433501 Gossypium raimondii
Gorai.007G120000 10.0kb downstream 10.0kb downstream 12717 true Chr07: 9433502-9446218 Gossypium raimondii
Gorai.007G120000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 9436219-9446218 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841630 5264 Brassicales-Malvales View MSA
124345370 5266 SBM View MSA
124249445 5268 Malvidae View MSA
124066514 5270 Rosid View MSA
123746353 5271 Pentapetalae View MSA
122791695 5272 Eudicot View MSA
122048646 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain