Protein Family : Pectin lyase-like superfamily protein 124345370

Method ID:  5266 Method Name:  SBM
Sequence Alignment:  View MSA Member Count:  18

18 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
orange1.1g040748m.g (1 of 1) PTHR31375:SF43 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN C. sinensis v1.1 2215   scaffold00001: 4065043-4067257
AT4G01890 (1 of 2) PTHR31375//PTHR31375:SF43 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN A. thaliana TAIR10 2219   Chr4: 816210-818428
AT1G02460 (1 of 2) PTHR31375//PTHR31375:SF43 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN A. thaliana TAIR10 2532   Chr1: 504673-507204
Thhalv10007481m.g (1 of 2) PTHR31375:SF43 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN E. salsugineum v1.0 2476   scaffold_5: 15100301-15102776
Ciclev10024556m.g (1 of 1) PTHR31375:SF43 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN C. clementina v1.0 3333   scaffold_3: 46855733-46859065
Gorai.008G136700 (1 of 2) PTHR31375:SF43 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN G. raimondii v2.1 2320   Chr08: 38591824-38594143
Gorai.007G120000 (1 of 2) PTHR31375:SF43 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN G. raimondii v2.1 2717   Chr07: 9433502-9436218
Thecc1EG004895 (1 of 1) PTHR31375//PTHR31375:SF43 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN T. cacao v1.1 2425   scaffold_1: 33989320-33991744
Araha.12648s0005 (1 of 2) PTHR31375:SF43 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN A. halleri v1.1 2103   Scaffold12648: 31016-33118
Araha.6793s0007 (1 of 2) PTHR31375:SF43 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN A. halleri v1.1 2417   Scaffold6793: 16637-19053
Cagra.0334s0028 (1 of 2) PTHR31375:SF43 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN C. grandiflora v1.1 1978   Scaffold334: 125495-127472
Cagra.1968s0015 (1 of 2) PTHR31375:SF43 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN C. grandiflora v1.1 2691   Scaffold1968: 45023-47713
Brara.C02842 (1 of 3) PTHR31375:SF43 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN B. rapa FPsc v1.3 2245   A03: 14599638-14601882
Bostr.16335s0076 (1 of 2) PTHR31375:SF43 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN B. stricta v1.2 2252   Scaffold16335: 575393-577644
AL6G51400 (1 of 2) PTHR31375:SF43 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN A. lyrata v2.1 2362   scaffold_6: 24065574-24067935
AL1G11800 (1 of 2) PTHR31375:SF43 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN A. lyrata v2.1 2739   scaffold_1: 628244-630982
Carub.0001s0153 (1 of 2) PTHR31375//PTHR31375:SF43 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN C. rubella v1.1 2313   scaffold_1: 527500-529812
Carub.0006s3534 (1 of 2) PTHR31375//PTHR31375:SF43 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN C. rubella v1.1 1969   scaffold_6: 15872085-15874053

18 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g040748m C. sinensis v1.1 124345370 Pectin lyase-like superfamily protein 1 5266 SBM
AT1G02460.1 A. thaliana TAIR10 124345370 Pectin lyase-like superfamily protein 2 5266 SBM
Gorai.007G120000.1 G. raimondii v2.1 124345370 Pectin lyase-like superfamily protein 2 5266 SBM
Gorai.008G136700.1 G. raimondii v2.1 124345370 Pectin lyase-like superfamily protein 2 5266 SBM
Thecc1EG004895t1 T. cacao v1.1 124345370 Pectin lyase-like superfamily protein 1 5266 SBM
Araha.6793s0007.1.p A. halleri v1.1 124345370 Pectin lyase-like superfamily protein 2 5266 SBM
Cagra.0334s0028.1.p C. grandiflora v1.1 124345370 Pectin lyase-like superfamily protein 2 5266 SBM
Cagra.1968s0015.1.p C. grandiflora v1.1 124345370 Pectin lyase-like superfamily protein 2 5266 SBM
Brara.C02842.1.p B. rapa FPsc v1.3 124345370 Pectin lyase-like superfamily protein 1 5266 SBM
AL6G51400.t1 A. lyrata v2.1 124345370 Pectin lyase-like superfamily protein 2 5266 SBM
AT4G01890.1 A. thaliana TAIR10 124345370 Pectin lyase-like superfamily protein 2 5266 SBM
Thhalv10007481m E. salsugineum v1.0 124345370 Pectin lyase-like superfamily protein 1 5266 SBM
Ciclev10024556m C. clementina v1.0 124345370 Pectin lyase-like superfamily protein 1 5266 SBM
Araha.12648s0005.1.p A. halleri v1.1 124345370 Pectin lyase-like superfamily protein 2 5266 SBM
Bostr.16335s0076.1.p B. stricta v1.2 124345370 Pectin lyase-like superfamily protein 1 5266 SBM
AL1G11800.t1 A. lyrata v2.1 124345370 Pectin lyase-like superfamily protein 2 5266 SBM
Carub.0006s3534.1.p C. rubella v1.1 124345370 Pectin lyase-like superfamily protein 2 5266 SBM
Carub.0001s0153.1.p C. rubella v1.1 124345370 Pectin lyase-like superfamily protein 2 5266 SBM