Gene : Gorai.007G278900 G. raimondii v2.1
Defline:  (1 of 7) PF03108//PF04434//PF10551 - MuDR family transposase (DBD_Tnp_Mut) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  2789
Name:  ? Gorai.007G278900 Secondary Identifier:  ? PAC:26784214
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.007G278900 0.5kb upstream 0.5kb upstream 4437 true Chr07: 47682853-47687289 Gossypium raimondii
Gorai.007G278900 0.5kb upstream 0.5kb upstream 500 false Chr07: 47682853-47683352 Gossypium raimondii
Gorai.007G278900 0.5kb downstream 0.5kb downstream 4437 true Chr07: 47683353-47687789 Gossypium raimondii
Gorai.007G278900 0.5kb downstream 0.5kb downstream 500 false Chr07: 47687290-47687789 Gossypium raimondii
Gorai.007G278900 1.0kb upstream 1.0kb upstream 4937 true Chr07: 47682353-47687289 Gossypium raimondii
Gorai.007G278900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 47682353-47683352 Gossypium raimondii
Gorai.007G278900 1.0kb downstream 1.0kb downstream 4937 true Chr07: 47683353-47688289 Gossypium raimondii
Gorai.007G278900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 47687290-47688289 Gossypium raimondii
Gorai.007G278900 2.0kb upstream 2.0kb upstream 5937 true Chr07: 47681353-47687289 Gossypium raimondii
Gorai.007G278900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 47681353-47683352 Gossypium raimondii
Gorai.007G278900 2.0kb downstream 2.0kb downstream 5937 true Chr07: 47683353-47689289 Gossypium raimondii
Gorai.007G278900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 47687290-47689289 Gossypium raimondii
Gorai.007G278900 5.0kb upstream 5.0kb upstream 8937 true Chr07: 47678353-47687289 Gossypium raimondii
Gorai.007G278900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 47678353-47683352 Gossypium raimondii
Gorai.007G278900 5.0kb downstream 5.0kb downstream 8937 true Chr07: 47683353-47692289 Gossypium raimondii
Gorai.007G278900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 47687290-47692289 Gossypium raimondii
Gorai.007G278900 10.0kb upstream 10.0kb upstream 13937 true Chr07: 47673353-47687289 Gossypium raimondii
Gorai.007G278900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 47673353-47683352 Gossypium raimondii
Gorai.007G278900 10.0kb downstream 10.0kb downstream 13937 true Chr07: 47683353-47697289 Gossypium raimondii
Gorai.007G278900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 47687290-47697289 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836717 5264 Brassicales-Malvales View MSA
124346447 5266 SBM View MSA
124250884 5268 Malvidae View MSA
124072231 5270 Rosid View MSA
123753345 5271 Pentapetalae View MSA
122797917 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain