Gene : Gorai.007G199800 G. raimondii v2.1
Defline:  (1 of 2) 2.4.1.245 - Alpha,alpha-trehalose synthase / Trehalose synthetase Genomic Order:  1998
Name:  ? Gorai.007G199800 Secondary Identifier:  ? PAC:26780118
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-3801 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.007G199800 0.5kb upstream 0.5kb upstream 5359 true Chr07: 20320363-20325721 Gossypium raimondii
Gorai.007G199800 0.5kb upstream 0.5kb upstream 500 false Chr07: 20320363-20320862 Gossypium raimondii
Gorai.007G199800 0.5kb downstream 0.5kb downstream 5359 true Chr07: 20320863-20326221 Gossypium raimondii
Gorai.007G199800 0.5kb downstream 0.5kb downstream 500 false Chr07: 20325722-20326221 Gossypium raimondii
Gorai.007G199800 1.0kb upstream 1.0kb upstream 5859 true Chr07: 20319863-20325721 Gossypium raimondii
Gorai.007G199800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 20319863-20320862 Gossypium raimondii
Gorai.007G199800 1.0kb downstream 1.0kb downstream 5859 true Chr07: 20320863-20326721 Gossypium raimondii
Gorai.007G199800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 20325722-20326721 Gossypium raimondii
Gorai.007G199800 2.0kb upstream 2.0kb upstream 6859 true Chr07: 20318863-20325721 Gossypium raimondii
Gorai.007G199800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 20318863-20320862 Gossypium raimondii
Gorai.007G199800 2.0kb downstream 2.0kb downstream 6859 true Chr07: 20320863-20327721 Gossypium raimondii
Gorai.007G199800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 20325722-20327721 Gossypium raimondii
Gorai.007G199800 5.0kb upstream 5.0kb upstream 9859 true Chr07: 20315863-20325721 Gossypium raimondii
Gorai.007G199800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 20315863-20320862 Gossypium raimondii
Gorai.007G199800 5.0kb downstream 5.0kb downstream 9859 true Chr07: 20320863-20330721 Gossypium raimondii
Gorai.007G199800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 20325722-20330721 Gossypium raimondii
Gorai.007G199800 10.0kb upstream 10.0kb upstream 14859 true Chr07: 20310863-20325721 Gossypium raimondii
Gorai.007G199800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 20310863-20320862 Gossypium raimondii
Gorai.007G199800 10.0kb downstream 10.0kb downstream 14859 true Chr07: 20320863-20335721 Gossypium raimondii
Gorai.007G199800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 20325722-20335721 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043473 5273 Angiosperm View MSA
123808680 5264 Brassicales-Malvales Singleton cluster - no MSA
124305481 5266 SBM Singleton cluster - no MSA
124253231 5268 Malvidae View MSA
124065607 5270 Rosid View MSA
123746815 5271 Pentapetalae View MSA
122786445 5272 Eudicot View MSA
121310134 5274 Embryophyte View MSA
123347706 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain