Gene : Gorai.007G230800 G. raimondii v2.1
Defline:  (1 of 1) PTHR11680//PTHR11680:SF8 - SERINE HYDROXYMETHYLTRANSFERASE Genomic Order:  2308
Name:  ? Gorai.007G230800 Secondary Identifier:  ? PAC:26782710
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii GLYSYN-PWY Gossypium raimondii pathologic  
Graimondii PWY-3841 Gossypium raimondii pathologic  
Graimondii SER-GLYSYN-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.007G230800 0.5kb upstream 0.5kb upstream 5746 true Chr07: 28919824-28925569 Gossypium raimondii
Gorai.007G230800 0.5kb upstream 0.5kb upstream 500 false Chr07: 28925070-28925569 Gossypium raimondii
Gorai.007G230800 0.5kb downstream 0.5kb downstream 5746 true Chr07: 28919324-28925069 Gossypium raimondii
Gorai.007G230800 0.5kb downstream 0.5kb downstream 500 false Chr07: 28919324-28919823 Gossypium raimondii
Gorai.007G230800 1.0kb upstream 1.0kb upstream 6246 true Chr07: 28919824-28926069 Gossypium raimondii
Gorai.007G230800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 28925070-28926069 Gossypium raimondii
Gorai.007G230800 1.0kb downstream 1.0kb downstream 6246 true Chr07: 28918824-28925069 Gossypium raimondii
Gorai.007G230800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 28918824-28919823 Gossypium raimondii
Gorai.007G230800 2.0kb upstream 2.0kb upstream 7246 true Chr07: 28919824-28927069 Gossypium raimondii
Gorai.007G230800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 28925070-28927069 Gossypium raimondii
Gorai.007G230800 2.0kb downstream 2.0kb downstream 7246 true Chr07: 28917824-28925069 Gossypium raimondii
Gorai.007G230800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 28917824-28919823 Gossypium raimondii
Gorai.007G230800 5.0kb upstream 5.0kb upstream 10246 true Chr07: 28919824-28930069 Gossypium raimondii
Gorai.007G230800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 28925070-28930069 Gossypium raimondii
Gorai.007G230800 5.0kb downstream 5.0kb downstream 10246 true Chr07: 28914824-28925069 Gossypium raimondii
Gorai.007G230800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 28914824-28919823 Gossypium raimondii
Gorai.007G230800 10.0kb upstream 10.0kb upstream 15246 true Chr07: 28919824-28935069 Gossypium raimondii
Gorai.007G230800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 28925070-28935069 Gossypium raimondii
Gorai.007G230800 10.0kb downstream 10.0kb downstream 15246 true Chr07: 28909824-28925069 Gossypium raimondii
Gorai.007G230800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 28909824-28919823 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832063 5264 Brassicales-Malvales View MSA
124337498 5266 SBM View MSA
124238878 5268 Malvidae View MSA
124064979 5270 Rosid View MSA
123747223 5271 Pentapetalae View MSA
122789073 5272 Eudicot View MSA
122045639 5273 Angiosperm View MSA
121346714 5274 Embryophyte View MSA
123424879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain