Gene : Gorai.011G091800 G. raimondii v2.1
Defline:  (1 of 2) 2.1.1.190 - 23S rRNA (uracil(1939)-C(5))-methyltransferase / RNA uridine methyltransferase A Genomic Order:  918
Name:  ? Gorai.011G091800 Secondary Identifier:  ? PAC:26809512
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.011G091800 0.5kb upstream 0.5kb upstream 5093 true Chr11: 9944791-9949883 Gossypium raimondii
Gorai.011G091800 0.5kb upstream 0.5kb upstream 500 false Chr11: 9944791-9945290 Gossypium raimondii
Gorai.011G091800 0.5kb downstream 0.5kb downstream 5093 true Chr11: 9945291-9950383 Gossypium raimondii
Gorai.011G091800 0.5kb downstream 0.5kb downstream 500 false Chr11: 9949884-9950383 Gossypium raimondii
Gorai.011G091800 1.0kb upstream 1.0kb upstream 5593 true Chr11: 9944291-9949883 Gossypium raimondii
Gorai.011G091800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 9944291-9945290 Gossypium raimondii
Gorai.011G091800 1.0kb downstream 1.0kb downstream 5593 true Chr11: 9945291-9950883 Gossypium raimondii
Gorai.011G091800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 9949884-9950883 Gossypium raimondii
Gorai.011G091800 2.0kb upstream 2.0kb upstream 6593 true Chr11: 9943291-9949883 Gossypium raimondii
Gorai.011G091800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 9943291-9945290 Gossypium raimondii
Gorai.011G091800 2.0kb downstream 2.0kb downstream 6593 true Chr11: 9945291-9951883 Gossypium raimondii
Gorai.011G091800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 9949884-9951883 Gossypium raimondii
Gorai.011G091800 5.0kb upstream 5.0kb upstream 9593 true Chr11: 9940291-9949883 Gossypium raimondii
Gorai.011G091800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 9940291-9945290 Gossypium raimondii
Gorai.011G091800 5.0kb downstream 5.0kb downstream 9593 true Chr11: 9945291-9954883 Gossypium raimondii
Gorai.011G091800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 9949884-9954883 Gossypium raimondii
Gorai.011G091800 10.0kb upstream 10.0kb upstream 14593 true Chr11: 9935291-9949883 Gossypium raimondii
Gorai.011G091800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 9935291-9945290 Gossypium raimondii
Gorai.011G091800 10.0kb downstream 10.0kb downstream 14593 true Chr11: 9945291-9959883 Gossypium raimondii
Gorai.011G091800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 9949884-9959883 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832680 5264 Brassicales-Malvales View MSA
124337597 5266 SBM View MSA
124241900 5268 Malvidae View MSA
124063737 5270 Rosid View MSA
123738222 5271 Pentapetalae View MSA
122796833 5272 Eudicot View MSA
122044630 5273 Angiosperm View MSA
121346457 5274 Embryophyte View MSA
123428846 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain