Gene : Gorai.011G095400 G. raimondii v2.1
Defline:  (1 of 2) PTHR11822:SF5 - ISOCITRATE DEHYDROGENASE [NADP], CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  954
Name:  ? Gorai.011G095400 Secondary Identifier:  ? PAC:26811945
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6549 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.011G095400 0.5kb upstream 0.5kb upstream 5813 true Chr11: 10370468-10376280 Gossypium raimondii
Gorai.011G095400 0.5kb upstream 0.5kb upstream 500 false Chr11: 10370468-10370967 Gossypium raimondii
Gorai.011G095400 0.5kb downstream 0.5kb downstream 5813 true Chr11: 10370968-10376780 Gossypium raimondii
Gorai.011G095400 0.5kb downstream 0.5kb downstream 500 false Chr11: 10376281-10376780 Gossypium raimondii
Gorai.011G095400 1.0kb upstream 1.0kb upstream 6313 true Chr11: 10369968-10376280 Gossypium raimondii
Gorai.011G095400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 10369968-10370967 Gossypium raimondii
Gorai.011G095400 1.0kb downstream 1.0kb downstream 6313 true Chr11: 10370968-10377280 Gossypium raimondii
Gorai.011G095400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 10376281-10377280 Gossypium raimondii
Gorai.011G095400 2.0kb upstream 2.0kb upstream 7313 true Chr11: 10368968-10376280 Gossypium raimondii
Gorai.011G095400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 10368968-10370967 Gossypium raimondii
Gorai.011G095400 2.0kb downstream 2.0kb downstream 7313 true Chr11: 10370968-10378280 Gossypium raimondii
Gorai.011G095400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 10376281-10378280 Gossypium raimondii
Gorai.011G095400 5.0kb upstream 5.0kb upstream 10313 true Chr11: 10365968-10376280 Gossypium raimondii
Gorai.011G095400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 10365968-10370967 Gossypium raimondii
Gorai.011G095400 5.0kb downstream 5.0kb downstream 10313 true Chr11: 10370968-10381280 Gossypium raimondii
Gorai.011G095400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 10376281-10381280 Gossypium raimondii
Gorai.011G095400 10.0kb upstream 10.0kb upstream 15313 true Chr11: 10360968-10376280 Gossypium raimondii
Gorai.011G095400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 10360968-10370967 Gossypium raimondii
Gorai.011G095400 10.0kb downstream 10.0kb downstream 15313 true Chr11: 10370968-10386280 Gossypium raimondii
Gorai.011G095400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 10376281-10386280 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041513 5273 Angiosperm View MSA
123812942 5264 Brassicales-Malvales Singleton cluster - no MSA
124309505 5266 SBM Singleton cluster - no MSA
124253580 5268 Malvidae View MSA
124066348 5270 Rosid View MSA
123740516 5271 Pentapetalae View MSA
122791819 5272 Eudicot View MSA
121349846 5274 Embryophyte View MSA
123426624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain